Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RB1P06400 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RB1P06400 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RB1P06400 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.6■□□□□ 0.25
RB1P06400 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RB1P06400 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RB1P06400 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
RB1P06400 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.59■□□□□ 0.25
RB1P06400 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RB1P06400 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.59■□□□□ 0.25
RB1P06400 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
RB1P06400 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.59■□□□□ 0.25
RB1P06400 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RB1P06400 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RB1P06400 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RB1P06400 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RB1P06400 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RB1P06400 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RB1P06400 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RB1P06400 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
RB1P06400 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
RB1P06400 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
RB1P06400 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.59■□□□□ 0.25
RB1P06400 ACTBP8-201ENST00000403258 1108 ntBASIC16.59■□□□□ 0.25
RB1P06400 MIR663B-201ENST00000408361 115 ntBASIC16.59■□□□□ 0.25
RB1P06400 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.59■□□□□ 0.25
RB1P06400 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.59■□□□□ 0.25
RB1P06400 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RB1P06400 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.59■□□□□ 0.25
RB1P06400 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.59■□□□□ 0.25
RB1P06400 AL096828.3-201ENST00000615354 462 ntBASIC16.59■□□□□ 0.25
RB1P06400 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RB1P06400 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RB1P06400 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
RB1P06400 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RB1P06400 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RB1P06400 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RB1P06400 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RB1P06400 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RB1P06400 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RB1P06400 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.59■□□□□ 0.25
RB1P06400 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RB1P06400 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RB1P06400 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
RB1P06400 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RB1P06400 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RB1P06400 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.58■□□□□ 0.25
RB1P06400 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.58■□□□□ 0.25
RB1P06400 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RB1P06400 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.58■□□□□ 0.25
RB1P06400 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
RB1P06400 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.58■□□□□ 0.25
RB1P06400 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
RB1P06400 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RB1P06400 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RB1P06400 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.58■□□□□ 0.24
RB1P06400 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.58■□□□□ 0.24
RB1P06400 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.58■□□□□ 0.24
RB1P06400 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.58■□□□□ 0.24
RB1P06400 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.58■□□□□ 0.24
RB1P06400 NUS1P3-201ENST00000423502 862 ntBASIC16.58■□□□□ 0.24
RB1P06400 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.58■□□□□ 0.24
RB1P06400 UPF3AP2-201ENST00000457924 1132 ntBASIC16.58■□□□□ 0.24
RB1P06400 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.58■□□□□ 0.24
RB1P06400 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RB1P06400 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RB1P06400 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
RB1P06400 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.58■□□□□ 0.24
RB1P06400 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RB1P06400 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RB1P06400 MIR3619-201ENST00000579667 83 ntBASIC16.58■□□□□ 0.24
RB1P06400 AC016629.1-201ENST00000596579 586 ntBASIC16.58■□□□□ 0.24
RB1P06400 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.58■□□□□ 0.24
RB1P06400 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.58■□□□□ 0.24
RB1P06400 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RB1P06400 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.58■□□□□ 0.24
RB1P06400 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RB1P06400 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
RB1P06400 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RB1P06400 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RB1P06400 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.58■□□□□ 0.24
RB1P06400 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RB1P06400 RNF216P1-203ENST00000404404 2427 ntBASIC16.58■□□□□ 0.24
RB1P06400 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RB1P06400 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.58■□□□□ 0.24
RB1P06400 AC106820.2-201ENST00000563775 3264 ntBASIC16.58■□□□□ 0.24
RB1P06400 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RB1P06400 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RB1P06400 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RB1P06400 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RB1P06400 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
RB1P06400 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RB1P06400 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RB1P06400 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.57■□□□□ 0.24
RB1P06400 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.57■□□□□ 0.24
RB1P06400 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.57■□□□□ 0.24
RB1P06400 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RB1P06400 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RB1P06400 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.57■□□□□ 0.24
RB1P06400 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms