Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC9.6□□□□□ -0.87
APOBP04114 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
APOBP04114 KRT8P14-201ENST00000414254 1442 ntBASIC9.6□□□□□ -0.87
APOBP04114 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
APOBP04114 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
APOBP04114 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC9.6□□□□□ -0.87
APOBP04114 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
APOBP04114 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
APOBP04114 AP002803.1-201ENST00000528836 498 ntBASIC9.6□□□□□ -0.87
APOBP04114 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
APOBP04114 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC9.6□□□□□ -0.87
APOBP04114 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
APOBP04114 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
APOBP04114 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC9.6□□□□□ -0.87
APOBP04114 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
APOBP04114 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
APOBP04114 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC9.6□□□□□ -0.87
APOBP04114 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
APOBP04114 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
APOBP04114 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
APOBP04114 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
APOBP04114 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
APOBP04114 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
APOBP04114 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC9.6□□□□□ -0.87
APOBP04114 OR2K2-202ENST00000374428 1038 ntBASIC9.6□□□□□ -0.87
APOBP04114 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC9.6□□□□□ -0.87
APOBP04114 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC9.6□□□□□ -0.87
APOBP04114 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
APOBP04114 RNMTL1P1-201ENST00000454103 560 ntBASIC9.6□□□□□ -0.87
APOBP04114 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC9.6□□□□□ -0.87
APOBP04114 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC9.6□□□□□ -0.87
APOBP04114 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC9.6□□□□□ -0.87
APOBP04114 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC9.6□□□□□ -0.87
APOBP04114 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC9.6□□□□□ -0.87
APOBP04114 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
APOBP04114 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
APOBP04114 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
APOBP04114 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
APOBP04114 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
APOBP04114 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
APOBP04114 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC9.6□□□□□ -0.87
APOBP04114 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
APOBP04114 KLF2P1-201ENST00000447438 1042 ntBASIC9.6□□□□□ -0.87
APOBP04114 AC010234.1-201ENST00000494599 870 ntBASIC9.6□□□□□ -0.87
APOBP04114 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC9.6□□□□□ -0.87
APOBP04114 DUX4L47-201ENST00000566374 394 ntBASIC9.6□□□□□ -0.87
APOBP04114 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
APOBP04114 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
APOBP04114 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
APOBP04114 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
APOBP04114 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
APOBP04114 AC144522.1-201ENST00000625111 1658 ntBASIC9.59□□□□□ -0.87
APOBP04114 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC9.59□□□□□ -0.87
APOBP04114 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
APOBP04114 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
APOBP04114 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
APOBP04114 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
APOBP04114 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
APOBP04114 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC9.59□□□□□ -0.87
APOBP04114 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC9.59□□□□□ -0.87
APOBP04114 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
APOBP04114 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
APOBP04114 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
APOBP04114 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
APOBP04114 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC9.59□□□□□ -0.87
APOBP04114 SOD2-202ENST00000367054 815 ntTSL 2 BASIC9.59□□□□□ -0.87
APOBP04114 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC9.59□□□□□ -0.87
APOBP04114 AL357563.1-201ENST00000404728 395 ntBASIC9.59□□□□□ -0.87
APOBP04114 AL139094.1-201ENST00000405549 1188 ntBASIC9.59□□□□□ -0.87
APOBP04114 EIF3FP3-201ENST00000434851 1086 ntBASIC9.59□□□□□ -0.87
APOBP04114 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC9.59□□□□□ -0.87
APOBP04114 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC9.59□□□□□ -0.87
APOBP04114 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC9.59□□□□□ -0.87
APOBP04114 DGAT2L7P-201ENST00000602462 744 ntBASIC9.59□□□□□ -0.87
APOBP04114 AL358472.3-201ENST00000608147 415 ntBASIC9.59□□□□□ -0.87
APOBP04114 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC9.59□□□□□ -0.87
APOBP04114 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
APOBP04114 AC106886.4-201ENST00000623557 2502 ntBASIC9.59□□□□□ -0.87
APOBP04114 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC9.59□□□□□ -0.87
APOBP04114 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
APOBP04114 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC9.59□□□□□ -0.87
APOBP04114 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC9.59□□□□□ -0.87
APOBP04114 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
APOBP04114 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC9.59□□□□□ -0.87
APOBP04114 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
APOBP04114 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
APOBP04114 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC9.59□□□□□ -0.87
APOBP04114 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC9.59□□□□□ -0.87
APOBP04114 AC006335.1-201ENST00000445200 547 ntBASIC9.59□□□□□ -0.87
APOBP04114 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
APOBP04114 PGAM1P5-201ENST00000548011 764 ntBASIC9.59□□□□□ -0.87
APOBP04114 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
APOBP04114 MIR6858-201ENST00000620733 67 ntBASIC9.59□□□□□ -0.87
APOBP04114 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC9.59□□□□□ -0.87
APOBP04114 TKT-202ENST00000423516 2075 ntTSL 2 BASIC9.59□□□□□ -0.87
APOBP04114 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
APOBP04114 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
APOBP04114 ME2P1-201ENST00000426028 1970 ntBASIC9.59□□□□□ -0.87
APOBP04114 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC9.59□□□□□ -0.87
APOBP04114 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms