Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFBP01127 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFBP01127 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFBP01127 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFBP01127 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFBP01127 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFBP01127 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.7■□□□□ 0.1
PDGFBP01127 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFBP01127 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.7■□□□□ 0.1
PDGFBP01127 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC15.7■□□□□ 0.1
PDGFBP01127 FAM8A4P-201ENST00000435433 1213 ntBASIC15.7■□□□□ 0.1
PDGFBP01127 AC011742.3-201ENST00000439053 820 ntBASIC15.7■□□□□ 0.1
PDGFBP01127 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC15.7■□□□□ 0.1
PDGFBP01127 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC15.7■□□□□ 0.1
PDGFBP01127 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC15.7■□□□□ 0.1
PDGFBP01127 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
PDGFBP01127 AL161670.2-201ENST00000557650 1227 ntBASIC15.7■□□□□ 0.1
PDGFBP01127 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.7■□□□□ 0.1
PDGFBP01127 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.7■□□□□ 0.1
PDGFBP01127 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFBP01127 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.7■□□□□ 0.1
PDGFBP01127 AC022748.3-201ENST00000621828 275 ntBASIC15.7■□□□□ 0.1
PDGFBP01127 AC009084.3-201ENST00000623356 437 ntBASIC15.7■□□□□ 0.1
PDGFBP01127 AP001002.3-201ENST00000623482 206 ntBASIC15.7■□□□□ 0.1
PDGFBP01127 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PDGFBP01127 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.7■□□□□ 0.1
PDGFBP01127 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
PDGFBP01127 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFBP01127 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFBP01127 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.7■□□□□ 0.1
PDGFBP01127 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFBP01127 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFBP01127 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFBP01127 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.7■□□□□ 0.1
PDGFBP01127 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.7■□□□□ 0.1
PDGFBP01127 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFBP01127 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
PDGFBP01127 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PDGFBP01127 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PDGFBP01127 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.69■□□□□ 0.1
PDGFBP01127 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.69■□□□□ 0.1
PDGFBP01127 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFBP01127 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFBP01127 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.69■□□□□ 0.1
PDGFBP01127 PKD1P1-201ENST00000458669 6805 ntBASIC15.69■□□□□ 0.1
PDGFBP01127 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.69■□□□□ 0.1
PDGFBP01127 AC018892.3-201ENST00000623986 2499 ntBASIC15.69■□□□□ 0.1
PDGFBP01127 DPM3-202ENST00000368399 517 ntBASIC15.69■□□□□ 0.1
PDGFBP01127 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
PDGFBP01127 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC15.69■□□□□ 0.1
PDGFBP01127 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.69■□□□□ 0.1
PDGFBP01127 CEP164P1-201ENST00000455142 418 ntBASIC15.69■□□□□ 0.1
PDGFBP01127 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.69■□□□□ 0.1
PDGFBP01127 IGLV3-15-201ENST00000518356 244 ntBASIC15.69■□□□□ 0.1
PDGFBP01127 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.69■□□□□ 0.1
PDGFBP01127 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.69■□□□□ 0.1
PDGFBP01127 COX6A1P2-201ENST00000620597 330 ntBASIC15.69■□□□□ 0.1
PDGFBP01127 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
PDGFBP01127 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFBP01127 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFBP01127 KRT8P4-201ENST00000509735 1454 ntBASIC15.69■□□□□ 0.1
PDGFBP01127 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PDGFBP01127 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PDGFBP01127 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFBP01127 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PDGFBP01127 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFBP01127 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFBP01127 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFBP01127 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFBP01127 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.69■□□□□ 0.1
PDGFBP01127 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFBP01127 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
PDGFBP01127 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFBP01127 CYP51A1P3-201ENST00000400072 1428 ntBASIC15.68■□□□□ 0.1
PDGFBP01127 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFBP01127 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFBP01127 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFBP01127 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.68■□□□□ 0.1
PDGFBP01127 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.68■□□□□ 0.1
PDGFBP01127 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFBP01127 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFBP01127 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFBP01127 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFBP01127 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.68■□□□□ 0.1
PDGFBP01127 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.68■□□□□ 0.1
PDGFBP01127 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFBP01127 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PDGFBP01127 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFBP01127 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.68■□□□□ 0.1
PDGFBP01127 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PDGFBP01127 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
PDGFBP01127 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFBP01127 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFBP01127 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PDGFBP01127 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFBP01127 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
PDGFBP01127 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFBP01127 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.68■□□□□ 0.1
PDGFBP01127 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFBP01127 HIST2H2BB-201ENST00000449108 381 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms