Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALDH1A1P00352 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
ALDH1A1P00352 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALDH1A1P00352 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALDH1A1P00352 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.8■□□□□ 0.44
ALDH1A1P00352 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ALDH1A1P00352 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALDH1A1P00352 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALDH1A1P00352 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ALDH1A1P00352 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ALDH1A1P00352 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALDH1A1P00352 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.8■□□□□ 0.44
ALDH1A1P00352 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ALDH1A1P00352 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ALDH1A1P00352 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ALDH1A1P00352 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC17.8■□□□□ 0.44
ALDH1A1P00352 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.8■□□□□ 0.44
ALDH1A1P00352 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.8■□□□□ 0.44
ALDH1A1P00352 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.8■□□□□ 0.44
ALDH1A1P00352 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.8■□□□□ 0.44
ALDH1A1P00352 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC17.8■□□□□ 0.44
ALDH1A1P00352 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.8■□□□□ 0.44
ALDH1A1P00352 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.8■□□□□ 0.44
ALDH1A1P00352 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALDH1A1P00352 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.8■□□□□ 0.44
ALDH1A1P00352 AC022748.3-201ENST00000621828 275 ntBASIC17.8■□□□□ 0.44
ALDH1A1P00352 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.8■□□□□ 0.44
ALDH1A1P00352 AP001002.3-201ENST00000623482 206 ntBASIC17.8■□□□□ 0.44
ALDH1A1P00352 AC011491.1-203ENST00000637688 543 ntBASIC17.8■□□□□ 0.44
ALDH1A1P00352 AL805961.1-203ENST00000641078 1258 ntBASIC17.8■□□□□ 0.44
ALDH1A1P00352 AC148477.4-201ENST00000613430 1793 ntBASIC17.8■□□□□ 0.44
ALDH1A1P00352 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.8■□□□□ 0.44
ALDH1A1P00352 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ALDH1A1P00352 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ALDH1A1P00352 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALDH1A1P00352 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.8■□□□□ 0.44
ALDH1A1P00352 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ALDH1A1P00352 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALDH1A1P00352 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALDH1A1P00352 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.8■□□□□ 0.44
ALDH1A1P00352 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALDH1A1P00352 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALDH1A1P00352 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.79■□□□□ 0.44
ALDH1A1P00352 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALDH1A1P00352 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALDH1A1P00352 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ALDH1A1P00352 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALDH1A1P00352 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALDH1A1P00352 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.79■□□□□ 0.44
ALDH1A1P00352 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ALDH1A1P00352 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
ALDH1A1P00352 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALDH1A1P00352 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ALDH1A1P00352 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALDH1A1P00352 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.79■□□□□ 0.44
ALDH1A1P00352 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.79■□□□□ 0.44
ALDH1A1P00352 AC098935.1-201ENST00000446057 611 ntBASIC17.79■□□□□ 0.44
ALDH1A1P00352 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.79■□□□□ 0.44
ALDH1A1P00352 AL353637.1-201ENST00000451571 732 ntBASIC17.79■□□□□ 0.44
ALDH1A1P00352 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.79■□□□□ 0.44
ALDH1A1P00352 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALDH1A1P00352 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.79■□□□□ 0.44
ALDH1A1P00352 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ALDH1A1P00352 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.79■□□□□ 0.44
ALDH1A1P00352 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
ALDH1A1P00352 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ALDH1A1P00352 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ALDH1A1P00352 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.79■□□□□ 0.44
ALDH1A1P00352 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.79■□□□□ 0.44
ALDH1A1P00352 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.79■□□□□ 0.44
ALDH1A1P00352 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ALDH1A1P00352 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ALDH1A1P00352 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALDH1A1P00352 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ALDH1A1P00352 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ALDH1A1P00352 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ALDH1A1P00352 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ALDH1A1P00352 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALDH1A1P00352 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ALDH1A1P00352 AL645937.2-201ENST00000396808 931 ntBASIC17.78■□□□□ 0.44
ALDH1A1P00352 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.78■□□□□ 0.44
ALDH1A1P00352 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC17.78■□□□□ 0.44
ALDH1A1P00352 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.78■□□□□ 0.44
ALDH1A1P00352 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.78■□□□□ 0.44
ALDH1A1P00352 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC17.78■□□□□ 0.44
ALDH1A1P00352 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.78■□□□□ 0.44
ALDH1A1P00352 RN7SL163P-201ENST00000583100 276 ntBASIC17.78■□□□□ 0.44
ALDH1A1P00352 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ALDH1A1P00352 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.78■□□□□ 0.44
ALDH1A1P00352 AL353770.1-201ENST00000614915 403 ntBASIC17.78■□□□□ 0.44
ALDH1A1P00352 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALDH1A1P00352 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
ALDH1A1P00352 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.78■□□□□ 0.44
ALDH1A1P00352 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALDH1A1P00352 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.78■□□□□ 0.44
ALDH1A1P00352 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ALDH1A1P00352 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ALDH1A1P00352 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
ALDH1A1P00352 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ALDH1A1P00352 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms