Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LRCH4O75427 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.46■□□□□ 0.22
LRCH4O75427 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH4O75427 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LRCH4O75427 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH4O75427 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH4O75427 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.45■□□□□ 0.22
LRCH4O75427 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.45■□□□□ 0.22
LRCH4O75427 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LRCH4O75427 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
LRCH4O75427 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH4O75427 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LRCH4O75427 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH4O75427 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH4O75427 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH4O75427 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH4O75427 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH4O75427 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LRCH4O75427 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH4O75427 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH4O75427 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH4O75427 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LRCH4O75427 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LRCH4O75427 AL645939.2-201ENST00000427340 991 ntBASIC16.45■□□□□ 0.22
LRCH4O75427 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.45■□□□□ 0.22
LRCH4O75427 AC125807.1-201ENST00000483097 614 ntBASIC16.45■□□□□ 0.22
LRCH4O75427 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.45■□□□□ 0.22
LRCH4O75427 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.45■□□□□ 0.22
LRCH4O75427 AC004449.1-201ENST00000564240 433 ntBASIC16.45■□□□□ 0.22
LRCH4O75427 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.45■□□□□ 0.22
LRCH4O75427 AC025048.3-201ENST00000590609 569 ntBASIC16.45■□□□□ 0.22
LRCH4O75427 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.45■□□□□ 0.22
LRCH4O75427 TEX28P1-201ENST00000613479 1221 ntBASIC16.45■□□□□ 0.22
LRCH4O75427 TEX28P2-201ENST00000617764 1221 ntBASIC16.45■□□□□ 0.22
LRCH4O75427 AC005702.4-201ENST00000618393 416 ntBASIC16.45■□□□□ 0.22
LRCH4O75427 MIR6069-201ENST00000620069 79 ntBASIC16.45■□□□□ 0.22
LRCH4O75427 AC093028.1-201ENST00000622998 982 ntBASIC16.45■□□□□ 0.22
LRCH4O75427 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH4O75427 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH4O75427 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH4O75427 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH4O75427 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.45■□□□□ 0.22
LRCH4O75427 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH4O75427 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH4O75427 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.45■□□□□ 0.22
LRCH4O75427 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.45■□□□□ 0.22
LRCH4O75427 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH4O75427 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
LRCH4O75427 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH4O75427 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.45■□□□□ 0.22
LRCH4O75427 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
LRCH4O75427 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LRCH4O75427 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
LRCH4O75427 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.45■□□□□ 0.22
LRCH4O75427 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH4O75427 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.45■□□□□ 0.22
LRCH4O75427 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH4O75427 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.45■□□□□ 0.22
LRCH4O75427 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH4O75427 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH4O75427 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
LRCH4O75427 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH4O75427 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.44■□□□□ 0.22
LRCH4O75427 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH4O75427 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH4O75427 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH4O75427 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH4O75427 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH4O75427 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH4O75427 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
LRCH4O75427 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH4O75427 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.44■□□□□ 0.22
LRCH4O75427 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LRCH4O75427 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH4O75427 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH4O75427 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.44■□□□□ 0.22
LRCH4O75427 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH4O75427 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH4O75427 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH4O75427 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LRCH4O75427 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
LRCH4O75427 KLF2P3-201ENST00000451977 1087 ntBASIC16.44■□□□□ 0.22
LRCH4O75427 SERBP1P3-201ENST00000459980 809 ntBASIC16.44■□□□□ 0.22
LRCH4O75427 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH4O75427 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.44■□□□□ 0.22
LRCH4O75427 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.44■□□□□ 0.22
LRCH4O75427 AL512361.1-201ENST00000554200 418 ntBASIC16.44■□□□□ 0.22
LRCH4O75427 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.44■□□□□ 0.22
LRCH4O75427 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.44■□□□□ 0.22
LRCH4O75427 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.44■□□□□ 0.22
LRCH4O75427 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.44■□□□□ 0.22
LRCH4O75427 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LRCH4O75427 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH4O75427 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.44■□□□□ 0.22
LRCH4O75427 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.44■□□□□ 0.22
LRCH4O75427 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH4O75427 Z97205.2-201ENST00000564697 1639 ntBASIC16.44■□□□□ 0.22
LRCH4O75427 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH4O75427 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LRCH4O75427 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms