Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 AC021097.1-201ENST00000607902 574 ntBASIC15.28■□□□□ 0.04
GSC2O15499 AC004706.3-202ENST00000621574 984 ntBASIC15.28■□□□□ 0.04
GSC2O15499 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
GSC2O15499 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.28■□□□□ 0.04
GSC2O15499 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GSC2O15499 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.28■□□□□ 0.04
GSC2O15499 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
GSC2O15499 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.28■□□□□ 0.04
GSC2O15499 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.28■□□□□ 0.04
GSC2O15499 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GSC2O15499 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GSC2O15499 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GSC2O15499 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GSC2O15499 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
GSC2O15499 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GSC2O15499 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GSC2O15499 AC012569.1-201ENST00000591191 1524 ntBASIC15.27■□□□□ 0.04
GSC2O15499 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GSC2O15499 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
GSC2O15499 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
GSC2O15499 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GSC2O15499 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GSC2O15499 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GSC2O15499 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
GSC2O15499 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
GSC2O15499 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GSC2O15499 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GSC2O15499 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.27■□□□□ 0.04
GSC2O15499 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GSC2O15499 KRT18P1-202ENST00000452408 1331 ntBASIC15.27■□□□□ 0.04
GSC2O15499 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
GSC2O15499 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
GSC2O15499 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GSC2O15499 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
GSC2O15499 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GSC2O15499 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GSC2O15499 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GSC2O15499 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.27■□□□□ 0.04
GSC2O15499 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.27■□□□□ 0.04
GSC2O15499 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.27■□□□□ 0.04
GSC2O15499 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.27■□□□□ 0.04
GSC2O15499 MIR4321-201ENST00000592276 80 ntBASIC15.27■□□□□ 0.04
GSC2O15499 AL121672.3-201ENST00000608644 468 ntBASIC15.27■□□□□ 0.04
GSC2O15499 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
GSC2O15499 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
GSC2O15499 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GSC2O15499 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
GSC2O15499 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GSC2O15499 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GSC2O15499 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
GSC2O15499 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
GSC2O15499 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.27■□□□□ 0.03
GSC2O15499 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
GSC2O15499 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
GSC2O15499 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.27■□□□□ 0.03
GSC2O15499 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GSC2O15499 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GSC2O15499 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GSC2O15499 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GSC2O15499 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.27■□□□□ 0.03
GSC2O15499 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GSC2O15499 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GSC2O15499 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GSC2O15499 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GSC2O15499 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GSC2O15499 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GSC2O15499 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.26■□□□□ 0.03
GSC2O15499 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.26■□□□□ 0.03
GSC2O15499 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
GSC2O15499 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.26■□□□□ 0.03
GSC2O15499 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.26■□□□□ 0.03
GSC2O15499 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GSC2O15499 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.26■□□□□ 0.03
GSC2O15499 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.26■□□□□ 0.03
GSC2O15499 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GSC2O15499 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GSC2O15499 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GSC2O15499 DRAXINP1-201ENST00000437611 948 ntBASIC15.26■□□□□ 0.03
GSC2O15499 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.26■□□□□ 0.03
GSC2O15499 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
GSC2O15499 AC104076.2-201ENST00000448912 469 ntBASIC15.26■□□□□ 0.03
GSC2O15499 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.26■□□□□ 0.03
GSC2O15499 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.26■□□□□ 0.03
GSC2O15499 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.26■□□□□ 0.03
GSC2O15499 AL136038.3-201ENST00000561909 1096 ntBASIC15.26■□□□□ 0.03
GSC2O15499 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.26■□□□□ 0.03
GSC2O15499 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.26■□□□□ 0.03
GSC2O15499 AC139887.3-201ENST00000568585 713 ntBASIC15.26■□□□□ 0.03
GSC2O15499 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.26■□□□□ 0.03
GSC2O15499 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GSC2O15499 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
GSC2O15499 OR2I1P-209ENST00000641730 5365 ntBASIC15.26■□□□□ 0.03
GSC2O15499 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GSC2O15499 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GSC2O15499 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GSC2O15499 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.26■□□□□ 0.03
GSC2O15499 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
GSC2O15499 CICP17-201ENST00000418553 2377 ntBASIC15.26■□□□□ 0.03
GSC2O15499 REXO1L2P-201ENST00000425429 2069 ntBASIC15.26■□□□□ 0.03
GSC2O15499 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms