Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 RPS3-201ENST00000278572 907 ntTSL 3 BASIC18.86■□□□□ 0.61
FOXN1O15353 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN1O15353 SPDYE17-201ENST00000412399 783 ntBASIC18.86■□□□□ 0.61
FOXN1O15353 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC18.86■□□□□ 0.61
FOXN1O15353 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.86■□□□□ 0.61
FOXN1O15353 AC007969.1-201ENST00000433675 447 ntBASIC18.86■□□□□ 0.61
FOXN1O15353 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.86■□□□□ 0.61
FOXN1O15353 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.86■□□□□ 0.61
FOXN1O15353 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN1O15353 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC18.86■□□□□ 0.61
FOXN1O15353 AC020914.3-201ENST00000594712 304 ntBASIC18.86■□□□□ 0.61
FOXN1O15353 AC244669.2-201ENST00000612320 853 ntBASIC18.86■□□□□ 0.61
FOXN1O15353 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC18.86■□□□□ 0.61
FOXN1O15353 AC008687.7-202ENST00000637404 953 ntBASIC18.86■□□□□ 0.61
FOXN1O15353 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN1O15353 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN1O15353 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.86■□□□□ 0.61
FOXN1O15353 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.86■□□□□ 0.61
FOXN1O15353 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN1O15353 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.86■□□□□ 0.61
FOXN1O15353 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN1O15353 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.86■□□□□ 0.61
FOXN1O15353 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.86■□□□□ 0.61
FOXN1O15353 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.86■□□□□ 0.61
FOXN1O15353 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
FOXN1O15353 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN1O15353 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN1O15353 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN1O15353 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.85■□□□□ 0.61
FOXN1O15353 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
FOXN1O15353 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN1O15353 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.85■□□□□ 0.61
FOXN1O15353 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC18.85■□□□□ 0.61
FOXN1O15353 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
FOXN1O15353 HARS-202ENST00000415192 1401 ntTSL 2 BASIC18.85■□□□□ 0.61
FOXN1O15353 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC18.85■□□□□ 0.61
FOXN1O15353 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN1O15353 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
FOXN1O15353 HLA-DQB2-229ENST00000411527 1059 ntBASIC18.85■□□□□ 0.61
FOXN1O15353 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN1O15353 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC18.85■□□□□ 0.61
FOXN1O15353 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.85■□□□□ 0.61
FOXN1O15353 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
FOXN1O15353 RN7SL399P-201ENST00000471648 279 ntBASIC18.85■□□□□ 0.61
FOXN1O15353 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC18.85■□□□□ 0.61
FOXN1O15353 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN1O15353 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.85■□□□□ 0.61
FOXN1O15353 MPDU1-223ENST00000582151 728 ntBASIC18.85■□□□□ 0.61
FOXN1O15353 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN1O15353 AC097724.1-201ENST00000609581 426 ntBASIC18.85■□□□□ 0.61
FOXN1O15353 RHOXF1P1-202ENST00000635473 501 ntBASIC18.85■□□□□ 0.61
FOXN1O15353 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN1O15353 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
FOXN1O15353 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN1O15353 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN1O15353 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN1O15353 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN1O15353 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
FOXN1O15353 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.85■□□□□ 0.61
FOXN1O15353 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN1O15353 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
FOXN1O15353 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
FOXN1O15353 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
FOXN1O15353 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN1O15353 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN1O15353 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN1O15353 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN1O15353 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
FOXN1O15353 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.84■□□□□ 0.61
FOXN1O15353 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN1O15353 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN1O15353 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN1O15353 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN1O15353 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN1O15353 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN1O15353 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN1O15353 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN1O15353 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC18.84■□□□□ 0.61
FOXN1O15353 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN1O15353 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
FOXN1O15353 AC016694.1-201ENST00000434179 700 ntBASIC18.84■□□□□ 0.61
FOXN1O15353 FTLP1-201ENST00000449155 526 ntBASIC18.84■□□□□ 0.61
FOXN1O15353 AL591846.1-201ENST00000451736 433 ntBASIC18.84■□□□□ 0.61
FOXN1O15353 RN7SL818P-201ENST00000485099 259 ntBASIC18.84■□□□□ 0.61
FOXN1O15353 FTLP10-202ENST00000505798 471 ntBASIC18.84■□□□□ 0.61
FOXN1O15353 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.84■□□□□ 0.61
FOXN1O15353 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.84■□□□□ 0.61
FOXN1O15353 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
FOXN1O15353 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC18.84■□□□□ 0.61
FOXN1O15353 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.84■□□□□ 0.61
FOXN1O15353 RN7SL725P-201ENST00000606439 259 ntBASIC18.84■□□□□ 0.61
FOXN1O15353 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN1O15353 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
FOXN1O15353 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN1O15353 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.84■□□□□ 0.61
FOXN1O15353 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.84■□□□□ 0.61
FOXN1O15353 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN1O15353 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.83■□□□□ 0.61
FOXN1O15353 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
FOXN1O15353 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms