Protein–RNA interactions for Protein: J3KSC0

LINC01387, Putative uncharacterized protein encoded by LINC01387, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01387J3KSC0 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 MEP1AP4-201ENST00000423244 1087 ntBASIC14.37□□□□□ -0.11
LINC01387J3KSC0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 AC099063.4-201ENST00000641099 1602 ntBASIC14.37□□□□□ -0.11
LINC01387J3KSC0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01387J3KSC0 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 AC134407.2-201ENST00000625089 1978 ntBASIC14.36□□□□□ -0.11
LINC01387J3KSC0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 AC007950.2-201ENST00000615045 2347 ntBASIC14.36□□□□□ -0.11
LINC01387J3KSC0 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 MRPS18AP1-201ENST00000414458 589 ntBASIC14.36□□□□□ -0.11
LINC01387J3KSC0 STK33P1-201ENST00000423835 1218 ntBASIC14.36□□□□□ -0.11
LINC01387J3KSC0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 AC025048.3-201ENST00000590609 569 ntBASIC14.36□□□□□ -0.11
LINC01387J3KSC0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 AC005702.4-201ENST00000618393 416 ntBASIC14.36□□□□□ -0.11
LINC01387J3KSC0 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 FER1L4-210ENST00000615531 5998 ntBASIC14.36□□□□□ -0.11
LINC01387J3KSC0 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LINC01387J3KSC0 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01387J3KSC0 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC01387J3KSC0 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01387J3KSC0 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01387J3KSC0 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms