Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 AC138969.3-201ENST00000546612 1459 ntBASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 AC138932.2-201ENST00000548268 1459 ntBASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 AC126755.4-201ENST00000549796 1459 ntBASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 AC093004.1-201ENST00000508850 424 ntBASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 TPRX2P-201ENST00000535362 881 ntBASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 SRD5A3P1-201ENST00000603021 949 ntBASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 AC004790.1-201ENST00000612686 536 ntBASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 CU639417.3-201ENST00000624240 1404 ntBASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 CYP4F24P-201ENST00000586049 1580 ntBASIC14.46□□□□□ -0.09
NPIPA2E9PIF3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
NPIPA2E9PIF3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
NPIPA2E9PIF3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.46□□□□□ -0.1
NPIPA2E9PIF3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NPIPA2E9PIF3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.46□□□□□ -0.1
NPIPA2E9PIF3 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
NPIPA2E9PIF3 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
NPIPA2E9PIF3 AL391825.1-201ENST00000457671 1364 ntBASIC14.46□□□□□ -0.1
NPIPA2E9PIF3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NPIPA2E9PIF3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
NPIPA2E9PIF3 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 AL391005.1-201ENST00000623953 2435 ntBASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 DGCR5-201ENST00000399539 862 ntBASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 CHCHD2P3-201ENST00000603038 451 ntBASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA2E9PIF3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms