Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC11.68□□□□□ -0.54
NACAE9PAV3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NACAE9PAV3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NACAE9PAV3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NACAE9PAV3 AC069224.1-201ENST00000566372 1715 ntBASIC11.68□□□□□ -0.54
NACAE9PAV3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
NACAE9PAV3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NACAE9PAV3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NACAE9PAV3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC11.68□□□□□ -0.54
NACAE9PAV3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
NACAE9PAV3 AC004461.1-201ENST00000412461 403 ntBASIC11.68□□□□□ -0.54
NACAE9PAV3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC11.68□□□□□ -0.54
NACAE9PAV3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC11.68□□□□□ -0.54
NACAE9PAV3 SPDYE11-202ENST00000450699 704 ntBASIC11.68□□□□□ -0.54
NACAE9PAV3 CEND1P1-201ENST00000451006 455 ntBASIC11.68□□□□□ -0.54
NACAE9PAV3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NACAE9PAV3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NACAE9PAV3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC11.68□□□□□ -0.54
NACAE9PAV3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
NACAE9PAV3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NACAE9PAV3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC11.68□□□□□ -0.54
NACAE9PAV3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC11.68□□□□□ -0.54
NACAE9PAV3 SPDYE9P-201ENST00000570642 692 ntBASIC11.68□□□□□ -0.54
NACAE9PAV3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC11.68□□□□□ -0.54
NACAE9PAV3 AL365330.1-201ENST00000607459 531 ntBASIC11.68□□□□□ -0.54
NACAE9PAV3 SPDYE10P-202ENST00000612005 668 ntBASIC11.68□□□□□ -0.54
NACAE9PAV3 SPDYE8P-202ENST00000612377 668 ntBASIC11.68□□□□□ -0.54
NACAE9PAV3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC11.68□□□□□ -0.54
NACAE9PAV3 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
NACAE9PAV3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC11.68□□□□□ -0.54
NACAE9PAV3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NACAE9PAV3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
NACAE9PAV3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC11.68□□□□□ -0.54
NACAE9PAV3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NACAE9PAV3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC11.68□□□□□ -0.54
NACAE9PAV3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NACAE9PAV3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NACAE9PAV3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
NACAE9PAV3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
NACAE9PAV3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NACAE9PAV3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
NACAE9PAV3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NACAE9PAV3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC11.68□□□□□ -0.54
NACAE9PAV3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC11.68□□□□□ -0.54
NACAE9PAV3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC11.68□□□□□ -0.54
NACAE9PAV3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NACAE9PAV3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC11.68□□□□□ -0.54
NACAE9PAV3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC11.68□□□□□ -0.54
NACAE9PAV3 HLA-DQB2-231ENST00000435145 2026 ntBASIC11.68□□□□□ -0.54
NACAE9PAV3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
NACAE9PAV3 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NACAE9PAV3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NACAE9PAV3 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NACAE9PAV3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NACAE9PAV3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NACAE9PAV3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
NACAE9PAV3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NACAE9PAV3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
NACAE9PAV3 MIR648-201ENST00000385046 94 ntBASIC11.67□□□□□ -0.54
NACAE9PAV3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
NACAE9PAV3 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
NACAE9PAV3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NACAE9PAV3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NACAE9PAV3 AL135744.1-201ENST00000565098 629 ntBASIC11.67□□□□□ -0.54
NACAE9PAV3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC11.67□□□□□ -0.54
NACAE9PAV3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC11.67□□□□□ -0.54
NACAE9PAV3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC11.67□□□□□ -0.54
NACAE9PAV3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NACAE9PAV3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC11.67□□□□□ -0.54
NACAE9PAV3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NACAE9PAV3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NACAE9PAV3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NACAE9PAV3 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
NACAE9PAV3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
NACAE9PAV3 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC11.67□□□□□ -0.54
NACAE9PAV3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NACAE9PAV3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
NACAE9PAV3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NACAE9PAV3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NACAE9PAV3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC11.67□□□□□ -0.54
NACAE9PAV3 AC023824.1-201ENST00000562945 2975 ntBASIC11.67□□□□□ -0.54
NACAE9PAV3 AR-208ENST00000612452 10676 ntTSL 5 BASIC11.67□□□□□ -0.54
NACAE9PAV3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC11.67□□□□□ -0.54
NACAE9PAV3 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
NACAE9PAV3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
NACAE9PAV3 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NACAE9PAV3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC11.67□□□□□ -0.54
NACAE9PAV3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
NACAE9PAV3 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NACAE9PAV3 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NACAE9PAV3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
NACAE9PAV3 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NACAE9PAV3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC11.67□□□□□ -0.54
NACAE9PAV3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC11.67□□□□□ -0.54
NACAE9PAV3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NACAE9PAV3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NACAE9PAV3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NACAE9PAV3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC11.67□□□□□ -0.54
NACAE9PAV3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC11.67□□□□□ -0.54
NACAE9PAV3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms