Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CFAP99D6REC4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.89■□□□□ 0.13
CFAP99D6REC4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CFAP99D6REC4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.89■□□□□ 0.13
CFAP99D6REC4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.89■□□□□ 0.13
CFAP99D6REC4 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.89■□□□□ 0.13
CFAP99D6REC4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CFAP99D6REC4 AC107890.1-201ENST00000422478 521 ntBASIC15.89■□□□□ 0.13
CFAP99D6REC4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CFAP99D6REC4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.89■□□□□ 0.13
CFAP99D6REC4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CFAP99D6REC4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.89■□□□□ 0.13
CFAP99D6REC4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.89■□□□□ 0.13
CFAP99D6REC4 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.89■□□□□ 0.13
CFAP99D6REC4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.89■□□□□ 0.13
CFAP99D6REC4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.89■□□□□ 0.13
CFAP99D6REC4 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.89■□□□□ 0.13
CFAP99D6REC4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.89■□□□□ 0.13
CFAP99D6REC4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.89■□□□□ 0.13
CFAP99D6REC4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.89■□□□□ 0.13
CFAP99D6REC4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CFAP99D6REC4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.89■□□□□ 0.13
CFAP99D6REC4 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CFAP99D6REC4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CFAP99D6REC4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.89■□□□□ 0.13
CFAP99D6REC4 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CFAP99D6REC4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CFAP99D6REC4 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CFAP99D6REC4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CFAP99D6REC4 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CFAP99D6REC4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CFAP99D6REC4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CFAP99D6REC4 AL136982.4-201ENST00000437689 1740 ntBASIC15.88■□□□□ 0.13
CFAP99D6REC4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CFAP99D6REC4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CFAP99D6REC4 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CFAP99D6REC4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CFAP99D6REC4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.88■□□□□ 0.13
CFAP99D6REC4 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CFAP99D6REC4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.88■□□□□ 0.13
CFAP99D6REC4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CFAP99D6REC4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.88■□□□□ 0.13
CFAP99D6REC4 AC126755.1-201ENST00000525846 6405 ntBASIC15.88■□□□□ 0.13
CFAP99D6REC4 AC134407.2-201ENST00000625089 1978 ntBASIC15.88■□□□□ 0.13
CFAP99D6REC4 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
CFAP99D6REC4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CFAP99D6REC4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CFAP99D6REC4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CFAP99D6REC4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CFAP99D6REC4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CFAP99D6REC4 AL645939.2-201ENST00000427340 991 ntBASIC15.88■□□□□ 0.13
CFAP99D6REC4 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.88■□□□□ 0.13
CFAP99D6REC4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.88■□□□□ 0.13
CFAP99D6REC4 AL589739.1-201ENST00000607720 493 ntBASIC15.88■□□□□ 0.13
CFAP99D6REC4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CFAP99D6REC4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.88■□□□□ 0.13
CFAP99D6REC4 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.88■□□□□ 0.13
CFAP99D6REC4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CFAP99D6REC4 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
CFAP99D6REC4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CFAP99D6REC4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CFAP99D6REC4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CFAP99D6REC4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.88■□□□□ 0.13
CFAP99D6REC4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CFAP99D6REC4 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CFAP99D6REC4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CFAP99D6REC4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CFAP99D6REC4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.88■□□□□ 0.13
CFAP99D6REC4 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CFAP99D6REC4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CFAP99D6REC4 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CFAP99D6REC4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.87■□□□□ 0.13
CFAP99D6REC4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CFAP99D6REC4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.87■□□□□ 0.13
CFAP99D6REC4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CFAP99D6REC4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CFAP99D6REC4 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.87■□□□□ 0.13
CFAP99D6REC4 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CFAP99D6REC4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.87■□□□□ 0.13
CFAP99D6REC4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CFAP99D6REC4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CFAP99D6REC4 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
CFAP99D6REC4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.87■□□□□ 0.13
CFAP99D6REC4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CFAP99D6REC4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.87■□□□□ 0.13
CFAP99D6REC4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CFAP99D6REC4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CFAP99D6REC4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.87■□□□□ 0.13
CFAP99D6REC4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CFAP99D6REC4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CFAP99D6REC4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.87■□□□□ 0.13
CFAP99D6REC4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.87■□□□□ 0.13
CFAP99D6REC4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.87■□□□□ 0.13
CFAP99D6REC4 AC069120.2-201ENST00000524091 540 ntBASIC15.87■□□□□ 0.13
CFAP99D6REC4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.87■□□□□ 0.13
CFAP99D6REC4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.87■□□□□ 0.13
CFAP99D6REC4 BANF1P1-201ENST00000553684 263 ntBASIC15.87■□□□□ 0.13
CFAP99D6REC4 AC140878.1-201ENST00000565277 250 ntBASIC15.87■□□□□ 0.13
CFAP99D6REC4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.87■□□□□ 0.13
CFAP99D6REC4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms