Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PLEKHD1A6NEE1 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC23.98■■□□□ 1.43
PLEKHD1A6NEE1 AC138649.2-201ENST00000615886 705 ntBASIC23.98■■□□□ 1.43
PLEKHD1A6NEE1 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
PLEKHD1A6NEE1 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PLEKHD1A6NEE1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PLEKHD1A6NEE1 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PLEKHD1A6NEE1 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PLEKHD1A6NEE1 LRRC59-203ENST00000576448 1531 ntBASIC23.98■■□□□ 1.43
PLEKHD1A6NEE1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
PLEKHD1A6NEE1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PLEKHD1A6NEE1 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC23.98■■□□□ 1.43
PLEKHD1A6NEE1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
PLEKHD1A6NEE1 FLJ38576-201ENST00000623820 2459 ntBASIC23.98■■□□□ 1.43
PLEKHD1A6NEE1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC23.97■■□□□ 1.43
PLEKHD1A6NEE1 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PLEKHD1A6NEE1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PLEKHD1A6NEE1 SDCCAG3P2-201ENST00000326105 1023 ntBASIC23.97■■□□□ 1.43
PLEKHD1A6NEE1 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
PLEKHD1A6NEE1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
PLEKHD1A6NEE1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
PLEKHD1A6NEE1 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC23.97■■□□□ 1.43
PLEKHD1A6NEE1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC23.97■■□□□ 1.43
PLEKHD1A6NEE1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PLEKHD1A6NEE1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
PLEKHD1A6NEE1 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
PLEKHD1A6NEE1 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC23.97■■□□□ 1.43
PLEKHD1A6NEE1 MPRIPP1-201ENST00000452433 1089 ntBASIC23.97■■□□□ 1.43
PLEKHD1A6NEE1 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PLEKHD1A6NEE1 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC23.97■■□□□ 1.43
PLEKHD1A6NEE1 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PLEKHD1A6NEE1 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PLEKHD1A6NEE1 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC23.97■■□□□ 1.43
PLEKHD1A6NEE1 MIR4706-201ENST00000582134 82 ntBASIC23.97■■□□□ 1.43
PLEKHD1A6NEE1 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
PLEKHD1A6NEE1 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC23.96■■□□□ 1.43
PLEKHD1A6NEE1 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PLEKHD1A6NEE1 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PLEKHD1A6NEE1 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PLEKHD1A6NEE1 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PLEKHD1A6NEE1 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PLEKHD1A6NEE1 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PLEKHD1A6NEE1 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PLEKHD1A6NEE1 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PLEKHD1A6NEE1 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PLEKHD1A6NEE1 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC23.96■■□□□ 1.43
PLEKHD1A6NEE1 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC23.96■■□□□ 1.43
PLEKHD1A6NEE1 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC23.96■■□□□ 1.43
PLEKHD1A6NEE1 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC23.96■■□□□ 1.43
PLEKHD1A6NEE1 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC23.96■■□□□ 1.43
PLEKHD1A6NEE1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
PLEKHD1A6NEE1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PLEKHD1A6NEE1 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PLEKHD1A6NEE1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PLEKHD1A6NEE1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
PLEKHD1A6NEE1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PLEKHD1A6NEE1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.43
PLEKHD1A6NEE1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.43
PLEKHD1A6NEE1 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
PLEKHD1A6NEE1 AMT-224ENST00000635808 1610 ntTSL 5 BASIC23.95■■□□□ 1.43
PLEKHD1A6NEE1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.43
PLEKHD1A6NEE1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC23.95■■□□□ 1.43
PLEKHD1A6NEE1 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
PLEKHD1A6NEE1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PLEKHD1A6NEE1 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PLEKHD1A6NEE1 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PLEKHD1A6NEE1 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC23.95■■□□□ 1.42
PLEKHD1A6NEE1 AL645937.2-201ENST00000396808 931 ntBASIC23.95■■□□□ 1.42
PLEKHD1A6NEE1 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC23.95■■□□□ 1.42
PLEKHD1A6NEE1 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC23.95■■□□□ 1.42
PLEKHD1A6NEE1 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC23.95■■□□□ 1.42
PLEKHD1A6NEE1 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PLEKHD1A6NEE1 PPY2P-201ENST00000582808 702 ntBASIC23.95■■□□□ 1.42
PLEKHD1A6NEE1 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PLEKHD1A6NEE1 MIR6727-201ENST00000620702 65 ntBASIC23.95■■□□□ 1.42
PLEKHD1A6NEE1 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC23.95■■□□□ 1.42
PLEKHD1A6NEE1 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC23.95■■□□□ 1.42
PLEKHD1A6NEE1 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC23.95■■□□□ 1.42
PLEKHD1A6NEE1 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
PLEKHD1A6NEE1 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PLEKHD1A6NEE1 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PLEKHD1A6NEE1 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.42
PLEKHD1A6NEE1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PLEKHD1A6NEE1 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
PLEKHD1A6NEE1 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PLEKHD1A6NEE1 ANKRD30BP2-201ENST00000435744 1610 ntBASIC23.95■■□□□ 1.42
PLEKHD1A6NEE1 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC23.95■■□□□ 1.42
PLEKHD1A6NEE1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
PLEKHD1A6NEE1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC23.94■■□□□ 1.42
PLEKHD1A6NEE1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
PLEKHD1A6NEE1 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC23.94■■□□□ 1.42
PLEKHD1A6NEE1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PLEKHD1A6NEE1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
PLEKHD1A6NEE1 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PLEKHD1A6NEE1 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PLEKHD1A6NEE1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC23.94■■□□□ 1.42
PLEKHD1A6NEE1 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC23.94■■□□□ 1.42
PLEKHD1A6NEE1 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PLEKHD1A6NEE1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PLEKHD1A6NEE1 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms