Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 AC120045.2-201ENST00000567334 178 ntBASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 AC124283.3-201ENST00000570869 594 ntBASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3BA6NDS4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 AC092364.2-201ENST00000596710 2692 ntBASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 KLF2P4-201ENST00000451959 1225 ntBASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 CTBP2P5-201ENST00000454986 1264 ntBASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 KRT18P43-201ENST00000469825 1281 ntBASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.02■□□□□ 0.16
TBC1D3BA6NDS4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
TBC1D3BA6NDS4 AL121723.1-201ENST00000445194 1519 ntBASIC16.02■□□□□ 0.15
TBC1D3BA6NDS4 PDIA3P1-201ENST00000471856 1510 ntBASIC16.02■□□□□ 0.15
TBC1D3BA6NDS4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TBC1D3BA6NDS4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TBC1D3BA6NDS4 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TBC1D3BA6NDS4 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TBC1D3BA6NDS4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
TBC1D3BA6NDS4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TBC1D3BA6NDS4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.02■□□□□ 0.15
TBC1D3BA6NDS4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.02■□□□□ 0.15
TBC1D3BA6NDS4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.02■□□□□ 0.15
TBC1D3BA6NDS4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TBC1D3BA6NDS4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 ANKRD19P-201ENST00000338192 862 ntBASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 AC068587.3-201ENST00000526613 355 ntBASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 AC009486.1-201ENST00000569860 813 ntBASIC16.01■□□□□ 0.15
TBC1D3BA6NDS4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms