Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 AL080243.2-201ENST00000418783 582 ntBASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 AC009477.1-201ENST00000452936 217 ntBASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 AL139010.1-201ENST00000454878 894 ntBASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPDC1A2A3K4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 AL844908.2-201ENST00000609461 460 ntBASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 AC022532.1-201ENST00000624563 1728 ntBASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PTPDC1A2A3K4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 MIR4313-201ENST00000580760 101 ntBASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 AC239800.4-201ENST00000603712 296 ntBASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 AC026979.3-201ENST00000607315 403 ntBASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 AC004233.3-201ENST00000607794 1269 ntBASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 AC008738.7-201ENST00000609744 511 ntBASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPDC1A2A3K4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms