Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC12.49□□□□□ -0.41
TSSC4Q9Y5U2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 GK-202ENST00000378941 458 ntTSL 3 BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 GNAQP1-201ENST00000444815 1067 ntBASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 AC055876.2-201ENST00000531834 546 ntBASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 API5-211ENST00000534695 560 ntTSL 5 BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 TIMM17BP1-201ENST00000545713 516 ntBASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TSSC4Q9Y5U2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TSSC4Q9Y5U2 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TSSC4Q9Y5U2 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TSSC4Q9Y5U2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TSSC4Q9Y5U2 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TSSC4Q9Y5U2 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TSSC4Q9Y5U2 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.47□□□□□ -0.41
TSSC4Q9Y5U2 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TSSC4Q9Y5U2 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TSSC4Q9Y5U2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
TSSC4Q9Y5U2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TSSC4Q9Y5U2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TSSC4Q9Y5U2 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.47□□□□□ -0.41
TSSC4Q9Y5U2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TSSC4Q9Y5U2 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TSSC4Q9Y5U2 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TSSC4Q9Y5U2 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TSSC4Q9Y5U2 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TSSC4Q9Y5U2 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TSSC4Q9Y5U2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms