Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 AC044860.1-202ENST00000559481 777 ntBASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 AC025048.3-201ENST00000590609 569 ntBASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 AC005702.4-201ENST00000618393 416 ntBASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 AL139384.1-201ENST00000612143 3047 ntBASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 AC022144.1-201ENST00000602255 1580 ntBASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 AL607033.1-201ENST00000623900 1599 ntBASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 TARDBPP1-201ENST00000442013 1203 ntBASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 SDHAP3-202ENST00000515467 728 ntBASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 ZNF890P-202ENST00000530367 1156 ntBASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 AC009407.1-201ENST00000568958 598 ntBASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 AL109936.8-201ENST00000641772 604 ntBASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.02■□□□□ 0.16
RAI2Q9Y5P3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAI2Q9Y5P3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
RAI2Q9Y5P3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RAI2Q9Y5P3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAI2Q9Y5P3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
RAI2Q9Y5P3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RAI2Q9Y5P3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
RAI2Q9Y5P3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAI2Q9Y5P3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
RAI2Q9Y5P3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.02■□□□□ 0.15
RAI2Q9Y5P3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAI2Q9Y5P3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.02■□□□□ 0.15
RAI2Q9Y5P3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms