Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 AC236430.1-201ENST00000402231 743 ntBASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 AC002472.2-201ENST00000442739 958 ntBASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 AL158211.3-201ENST00000607385 239 ntBASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 AL138828.2-201ENST00000615812 383 ntBASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 AL136982.4-201ENST00000437689 1740 ntBASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.63□□□□□ -0.07
RPH3AQ9Y2J0 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 MIR648-201ENST00000385046 94 ntBASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 AC092580.3-201ENST00000430932 139 ntBASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3AQ9Y2J0 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms