Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NINLQ9Y2I6 AC024909.3-201ENST00000611513 2257 ntBASIC21.46■■□□□ 1.03
NINLQ9Y2I6 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC21.46■■□□□ 1.03
NINLQ9Y2I6 ACE-203ENST00000413513 2237 ntTSL 2 BASIC21.46■■□□□ 1.03
NINLQ9Y2I6 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NINLQ9Y2I6 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC21.46■■□□□ 1.03
NINLQ9Y2I6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC21.46■■□□□ 1.03
NINLQ9Y2I6 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
NINLQ9Y2I6 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NINLQ9Y2I6 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
NINLQ9Y2I6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
NINLQ9Y2I6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC21.46■■□□□ 1.03
NINLQ9Y2I6 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NINLQ9Y2I6 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
NINLQ9Y2I6 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
NINLQ9Y2I6 ACKR1-201ENST00000368121 1240 ntBASIC21.46■■□□□ 1.03
NINLQ9Y2I6 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NINLQ9Y2I6 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
NINLQ9Y2I6 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NINLQ9Y2I6 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC21.46■■□□□ 1.03
NINLQ9Y2I6 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC21.46■■□□□ 1.03
NINLQ9Y2I6 USB1-203ENST00000539737 1212 ntTSL 2 BASIC21.46■■□□□ 1.03
NINLQ9Y2I6 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC21.46■■□□□ 1.03
NINLQ9Y2I6 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC21.46■■□□□ 1.03
NINLQ9Y2I6 IFT20-206ENST00000578122 834 ntTSL 2 BASIC21.46■■□□□ 1.03
NINLQ9Y2I6 IFT20-208ENST00000578985 831 ntTSL 3 BASIC21.46■■□□□ 1.03
NINLQ9Y2I6 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC21.46■■□□□ 1.03
NINLQ9Y2I6 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC21.46■■□□□ 1.03
NINLQ9Y2I6 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NINLQ9Y2I6 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
NINLQ9Y2I6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 AC022188.1-201ENST00000620960 1664 ntBASIC21.45■■□□□ 1.02
NINLQ9Y2I6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 ANKRD19P-201ENST00000338192 862 ntBASIC21.45■■□□□ 1.02
NINLQ9Y2I6 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 AC103810.3-201ENST00000583567 96 ntBASIC21.45■■□□□ 1.02
NINLQ9Y2I6 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC21.45■■□□□ 1.02
NINLQ9Y2I6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC21.44■■□□□ 1.02
NINLQ9Y2I6 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC21.44■■□□□ 1.02
NINLQ9Y2I6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NINLQ9Y2I6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NINLQ9Y2I6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC21.44■■□□□ 1.02
NINLQ9Y2I6 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NINLQ9Y2I6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC21.44■■□□□ 1.02
NINLQ9Y2I6 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC21.44■■□□□ 1.02
NINLQ9Y2I6 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NINLQ9Y2I6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC21.44■■□□□ 1.02
NINLQ9Y2I6 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NINLQ9Y2I6 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
NINLQ9Y2I6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NINLQ9Y2I6 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC21.44■■□□□ 1.02
NINLQ9Y2I6 TP73-213ENST00000604479 1623 ntTSL 5 BASIC21.44■■□□□ 1.02
NINLQ9Y2I6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NINLQ9Y2I6 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NINLQ9Y2I6 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NINLQ9Y2I6 BAATP1-201ENST00000412284 1225 ntBASIC21.44■■□□□ 1.02
NINLQ9Y2I6 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
NINLQ9Y2I6 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
NINLQ9Y2I6 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NINLQ9Y2I6 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
NINLQ9Y2I6 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC21.44■■□□□ 1.02
NINLQ9Y2I6 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
NINLQ9Y2I6 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC21.44■■□□□ 1.02
NINLQ9Y2I6 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NINLQ9Y2I6 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC21.44■■□□□ 1.02
NINLQ9Y2I6 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
NINLQ9Y2I6 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC21.44■■□□□ 1.02
NINLQ9Y2I6 TKT-202ENST00000423516 2075 ntTSL 2 BASIC21.43■■□□□ 1.02
NINLQ9Y2I6 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC21.43■■□□□ 1.02
NINLQ9Y2I6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NINLQ9Y2I6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
NINLQ9Y2I6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC21.43■■□□□ 1.02
NINLQ9Y2I6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms