Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LHX6Q9UPM6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 ATG10-IT1-201ENST00000396880 487 ntBASIC15.13■□□□□ 0.01
LHX6Q9UPM6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 DUXAP7-201ENST00000431038 689 ntBASIC15.13■□□□□ 0.01
LHX6Q9UPM6 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 MIR4750-201ENST00000584564 56 ntBASIC15.13■□□□□ 0.01
LHX6Q9UPM6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.13■□□□□ 0.01
LHX6Q9UPM6 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 AL118508.1-201ENST00000613502 2345 ntBASIC15.12■□□□□ 0.01
LHX6Q9UPM6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 AC092964.1-201ENST00000623304 1399 ntBASIC15.12■□□□□ 0.01
LHX6Q9UPM6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 MGST1-204ENST00000396209 979 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 RN7SL818P-201ENST00000485099 259 ntBASIC15.12■□□□□ 0.01
LHX6Q9UPM6 FAM86HP-204ENST00000513466 959 ntBASIC15.12■□□□□ 0.01
LHX6Q9UPM6 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 RN7SL725P-201ENST00000606439 259 ntBASIC15.12■□□□□ 0.01
LHX6Q9UPM6 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 HLA-C-210ENST00000640219 976 ntBASIC15.12■□□□□ 0.01
LHX6Q9UPM6 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 AC138028.6-201ENST00000616106 1482 ntBASIC15.12■□□□□ 0.01
LHX6Q9UPM6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.12■□□□□ 0.01
LHX6Q9UPM6 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms