Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC21.04■□□□□ 0.96
NPC1L1Q9UHC9 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 PPT1-215ENST00000641471 2368 ntBASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 GSN-206ENST00000394353 2311 ntTSL 2 BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 POLE2-203ENST00000553805 496 ntTSL 2 BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 AL138799.1-201ENST00000448213 1675 ntBASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 STRN-202ENST00000379213 2254 ntTSL 5 BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NPC1L1Q9UHC9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 BRF1-202ENST00000379932 884 ntTSL 5 BASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 B9D1-203ENST00000395615 805 ntTSL 3 BASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 NME2P1-201ENST00000426182 414 ntBASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 CR383656.12-201ENST00000549567 513 ntBASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 CLUHP6-201ENST00000580789 941 ntBASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 AC133539.2-201ENST00000604757 467 ntBASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 LCK-206ENST00000373564 2137 ntTSL 5 BASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 PRAL-201ENST00000624952 3286 ntBASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPC1L1Q9UHC9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
NPC1L1Q9UHC9 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NPC1L1Q9UHC9 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.02■□□□□ 0.95
NPC1L1Q9UHC9 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPC1L1Q9UHC9 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC21.01■□□□□ 0.95
NPC1L1Q9UHC9 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
NPC1L1Q9UHC9 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPC1L1Q9UHC9 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPC1L1Q9UHC9 AL645937.2-201ENST00000396808 931 ntBASIC21.01■□□□□ 0.95
NPC1L1Q9UHC9 SAMD11P1-201ENST00000571429 661 ntBASIC21.01■□□□□ 0.95
NPC1L1Q9UHC9 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC21.01■□□□□ 0.95
NPC1L1Q9UHC9 CECR7-204ENST00000609932 568 ntTSL 2 BASIC21.01■□□□□ 0.95
NPC1L1Q9UHC9 ABBA01031660.1-201ENST00000635219 756 ntBASIC21.01■□□□□ 0.95
NPC1L1Q9UHC9 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPC1L1Q9UHC9 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NPC1L1Q9UHC9 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NPC1L1Q9UHC9 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
NPC1L1Q9UHC9 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC21.01■□□□□ 0.95
NPC1L1Q9UHC9 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPC1L1Q9UHC9 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NPC1L1Q9UHC9 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPC1L1Q9UHC9 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NPC1L1Q9UHC9 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC21.01■□□□□ 0.95
NPC1L1Q9UHC9 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NPC1L1Q9UHC9 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
NPC1L1Q9UHC9 AL139384.1-201ENST00000612143 3047 ntBASIC21.01■□□□□ 0.95
NPC1L1Q9UHC9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.01■□□□□ 0.95
NPC1L1Q9UHC9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
NPC1L1Q9UHC9 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms