Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 PRSS30P-206ENST00000641773 873 ntBASIC14.53□□□□□ -0.08
DKK4Q9UBT3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
DKK4Q9UBT3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
DKK4Q9UBT3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DKK4Q9UBT3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
DKK4Q9UBT3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.53□□□□□ -0.08
DKK4Q9UBT3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.53□□□□□ -0.08
DKK4Q9UBT3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.53□□□□□ -0.08
DKK4Q9UBT3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
DKK4Q9UBT3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
DKK4Q9UBT3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.53□□□□□ -0.08
DKK4Q9UBT3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.52□□□□□ -0.08
DKK4Q9UBT3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
DKK4Q9UBT3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
DKK4Q9UBT3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DKK4Q9UBT3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DKK4Q9UBT3 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC14.52□□□□□ -0.08
DKK4Q9UBT3 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
DKK4Q9UBT3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
DKK4Q9UBT3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.52□□□□□ -0.08
DKK4Q9UBT3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DKK4Q9UBT3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DKK4Q9UBT3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
DKK4Q9UBT3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
DKK4Q9UBT3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
DKK4Q9UBT3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DKK4Q9UBT3 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DKK4Q9UBT3 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DKK4Q9UBT3 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
DKK4Q9UBT3 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
DKK4Q9UBT3 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DKK4Q9UBT3 RPSAP31-201ENST00000416648 895 ntBASIC14.52□□□□□ -0.09
DKK4Q9UBT3 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.52□□□□□ -0.09
DKK4Q9UBT3 RN7SL181P-201ENST00000462921 277 ntBASIC14.52□□□□□ -0.09
DKK4Q9UBT3 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.52□□□□□ -0.09
DKK4Q9UBT3 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
DKK4Q9UBT3 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC14.52□□□□□ -0.09
DKK4Q9UBT3 AC005730.2-201ENST00000564549 1184 ntBASIC14.52□□□□□ -0.09
DKK4Q9UBT3 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.52□□□□□ -0.09
DKK4Q9UBT3 AC006453.1-201ENST00000636037 1257 ntBASIC14.52□□□□□ -0.09
DKK4Q9UBT3 AL805961.1-203ENST00000641078 1258 ntBASIC14.52□□□□□ -0.09
DKK4Q9UBT3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
DKK4Q9UBT3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
DKK4Q9UBT3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.09
DKK4Q9UBT3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DKK4Q9UBT3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
DKK4Q9UBT3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DKK4Q9UBT3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DKK4Q9UBT3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
DKK4Q9UBT3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DKK4Q9UBT3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
DKK4Q9UBT3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DKK4Q9UBT3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 RNF216P1-203ENST00000404404 2427 ntBASIC14.51□□□□□ -0.09
DKK4Q9UBT3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 RNU1-114P-201ENST00000365297 166 ntBASIC14.51□□□□□ -0.09
DKK4Q9UBT3 AC234644.1-201ENST00000406065 370 ntBASIC14.51□□□□□ -0.09
DKK4Q9UBT3 ACTG1P2-201ENST00000415776 1125 ntBASIC14.51□□□□□ -0.09
DKK4Q9UBT3 ACTG1P11-201ENST00000425411 1125 ntBASIC14.51□□□□□ -0.09
DKK4Q9UBT3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.51□□□□□ -0.09
DKK4Q9UBT3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
DKK4Q9UBT3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
DKK4Q9UBT3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.5□□□□□ -0.09
DKK4Q9UBT3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
DKK4Q9UBT3 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
DKK4Q9UBT3 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
DKK4Q9UBT3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
DKK4Q9UBT3 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
DKK4Q9UBT3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
DKK4Q9UBT3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
DKK4Q9UBT3 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms