Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 WFDC1-204ENST00000613603 549 ntBASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 AC018892.3-201ENST00000623986 2499 ntBASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 AC092552.1-201ENST00000547243 906 ntBASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 AC006449.5-201ENST00000610658 2098 ntBASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLCF1Q9UBD9 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLCF1Q9UBD9 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLCF1Q9UBD9 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLCF1Q9UBD9 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLCF1Q9UBD9 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.05□□□□□ -0.16
CLCF1Q9UBD9 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.05□□□□□ -0.16
CLCF1Q9UBD9 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
CLCF1Q9UBD9 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.05□□□□□ -0.16
CLCF1Q9UBD9 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLCF1Q9UBD9 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.05□□□□□ -0.16
CLCF1Q9UBD9 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.05□□□□□ -0.16
CLCF1Q9UBD9 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLCF1Q9UBD9 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLCF1Q9UBD9 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CLCF1Q9UBD9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLCF1Q9UBD9 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLCF1Q9UBD9 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLCF1Q9UBD9 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.05□□□□□ -0.16
CLCF1Q9UBD9 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLCF1Q9UBD9 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CLCF1Q9UBD9 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
CLCF1Q9UBD9 CDC14C-201ENST00000428251 1719 ntBASIC14.05□□□□□ -0.16
CLCF1Q9UBD9 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.05□□□□□ -0.16
CLCF1Q9UBD9 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms