Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 ACTG1P3-201ENST00000431775 1114 ntBASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 CROCCP4-201ENST00000457096 498 ntBASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 SLC25A47P1-201ENST00000531577 414 ntBASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 AC097359.3-201ENST00000603982 1210 ntBASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRIT1Q9P2V4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.27■□□□□ 0.03
LRIT1Q9P2V4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
LRIT1Q9P2V4 AC018892.3-201ENST00000623986 2499 ntBASIC15.27■□□□□ 0.03
LRIT1Q9P2V4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRIT1Q9P2V4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
LRIT1Q9P2V4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.27■□□□□ 0.03
LRIT1Q9P2V4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
LRIT1Q9P2V4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
LRIT1Q9P2V4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LRIT1Q9P2V4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.27■□□□□ 0.03
LRIT1Q9P2V4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LRIT1Q9P2V4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.27■□□□□ 0.03
LRIT1Q9P2V4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRIT1Q9P2V4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LRIT1Q9P2V4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LRIT1Q9P2V4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.27■□□□□ 0.03
LRIT1Q9P2V4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
LRIT1Q9P2V4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 INTS4P2-202ENST00000614726 2019 ntBASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 BOLA2P3-201ENST00000404566 256 ntBASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 SOCS2P1-201ENST00000417727 557 ntBASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 HLA-V-201ENST00000429037 534 ntBASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 TDH-203ENST00000531764 1110 ntBASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 ENPP7P5-201ENST00000541031 1031 ntBASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 AP005482.1-201ENST00000563722 1273 ntBASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 AC233724.13-201ENST00000598383 410 ntBASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 RPSAP52-203ENST00000622976 1023 ntBASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.26■□□□□ 0.03
LRIT1Q9P2V4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms