Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.24■□□□□ 0.67
HMG20BQ9P0W2 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMG20BQ9P0W2 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMG20BQ9P0W2 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMG20BQ9P0W2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.23■□□□□ 0.67
HMG20BQ9P0W2 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMG20BQ9P0W2 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.23■□□□□ 0.67
HMG20BQ9P0W2 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMG20BQ9P0W2 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
HMG20BQ9P0W2 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMG20BQ9P0W2 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
HMG20BQ9P0W2 TOMM22P5-201ENST00000416399 439 ntBASIC19.23■□□□□ 0.67
HMG20BQ9P0W2 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC19.23■□□□□ 0.67
HMG20BQ9P0W2 PTPA-220ENST00000436883 532 ntTSL 4 BASIC19.23■□□□□ 0.67
HMG20BQ9P0W2 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
HMG20BQ9P0W2 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC19.23■□□□□ 0.67
HMG20BQ9P0W2 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC19.23■□□□□ 0.67
HMG20BQ9P0W2 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC19.23■□□□□ 0.67
HMG20BQ9P0W2 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
HMG20BQ9P0W2 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.23■□□□□ 0.67
HMG20BQ9P0W2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMG20BQ9P0W2 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMG20BQ9P0W2 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMG20BQ9P0W2 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMG20BQ9P0W2 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.23■□□□□ 0.67
HMG20BQ9P0W2 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
HMG20BQ9P0W2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
HMG20BQ9P0W2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMG20BQ9P0W2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
HMG20BQ9P0W2 CLK3P2-201ENST00000427566 1453 ntBASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 AC105917.1-201ENST00000506637 2539 ntBASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 DEK-201ENST00000244776 1441 ntTSL 2 BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 CU639417.3-201ENST00000624240 1404 ntBASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMG20BQ9P0W2 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 AC098614.1-201ENST00000368528 745 ntBASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 RN7SL399P-201ENST00000471648 279 ntBASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 SLED1-202ENST00000512051 380 ntBASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 MIR4313-201ENST00000580760 101 ntBASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
HMG20BQ9P0W2 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms