Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 AC134915.1-201ENST00000426461 574 ntBASIC17.02■□□□□ 0.32
NXF3Q9H4D5 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 AC120045.2-201ENST00000567334 178 ntBASIC17.02■□□□□ 0.32
NXF3Q9H4D5 AC106886.1-201ENST00000568660 600 ntBASIC17.02■□□□□ 0.32
NXF3Q9H4D5 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.02■□□□□ 0.32
NXF3Q9H4D5 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NXF3Q9H4D5 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NXF3Q9H4D5 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
NXF3Q9H4D5 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NXF3Q9H4D5 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.02■□□□□ 0.31
NXF3Q9H4D5 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NXF3Q9H4D5 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.02■□□□□ 0.31
NXF3Q9H4D5 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NXF3Q9H4D5 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 RPL13AP25-201ENST00000484130 612 ntBASIC17.01■□□□□ 0.31
NXF3Q9H4D5 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 USP32P1-208ENST00000506594 1164 ntBASIC17.01■□□□□ 0.31
NXF3Q9H4D5 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 RAB43P1-201ENST00000561790 589 ntBASIC17.01■□□□□ 0.31
NXF3Q9H4D5 MIR5189-201ENST00000577370 114 ntBASIC17.01■□□□□ 0.31
NXF3Q9H4D5 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 AC015936.2-201ENST00000593177 259 ntBASIC17.01■□□□□ 0.31
NXF3Q9H4D5 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.01■□□□□ 0.31
NXF3Q9H4D5 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NXF3Q9H4D5 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17■□□□□ 0.31
NXF3Q9H4D5 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17■□□□□ 0.31
NXF3Q9H4D5 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17■□□□□ 0.31
NXF3Q9H4D5 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
NXF3Q9H4D5 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17■□□□□ 0.31
NXF3Q9H4D5 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NXF3Q9H4D5 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NXF3Q9H4D5 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NXF3Q9H4D5 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NXF3Q9H4D5 C1QBPP1-201ENST00000400117 770 ntBASIC17■□□□□ 0.31
NXF3Q9H4D5 SOCS2P1-201ENST00000417727 557 ntBASIC17■□□□□ 0.31
NXF3Q9H4D5 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
NXF3Q9H4D5 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
NXF3Q9H4D5 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17■□□□□ 0.31
NXF3Q9H4D5 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17■□□□□ 0.31
NXF3Q9H4D5 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17■□□□□ 0.31
NXF3Q9H4D5 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17■□□□□ 0.31
NXF3Q9H4D5 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NXF3Q9H4D5 AL359881.2-201ENST00000602973 570 ntBASIC17■□□□□ 0.31
NXF3Q9H4D5 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NXF3Q9H4D5 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17■□□□□ 0.31
NXF3Q9H4D5 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NXF3Q9H4D5 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NXF3Q9H4D5 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NXF3Q9H4D5 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NXF3Q9H4D5 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NXF3Q9H4D5 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.99■□□□□ 0.31
NXF3Q9H4D5 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NXF3Q9H4D5 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
NXF3Q9H4D5 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
NXF3Q9H4D5 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.99■□□□□ 0.31
NXF3Q9H4D5 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.99■□□□□ 0.31
NXF3Q9H4D5 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
NXF3Q9H4D5 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.99■□□□□ 0.31
NXF3Q9H4D5 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.99■□□□□ 0.31
NXF3Q9H4D5 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.99■□□□□ 0.31
NXF3Q9H4D5 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms