Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK3Q9H422 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK3Q9H422 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK3Q9H422 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
HIPK3Q9H422 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
HIPK3Q9H422 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.21■□□□□ 0.35
HIPK3Q9H422 KRT18P25-201ENST00000508931 1278 ntBASIC17.21■□□□□ 0.35
HIPK3Q9H422 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.21■□□□□ 0.35
HIPK3Q9H422 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.21■□□□□ 0.35
HIPK3Q9H422 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.21■□□□□ 0.35
HIPK3Q9H422 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.21■□□□□ 0.35
HIPK3Q9H422 AC097359.3-201ENST00000603982 1210 ntBASIC17.21■□□□□ 0.35
HIPK3Q9H422 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.21■□□□□ 0.35
HIPK3Q9H422 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK3Q9H422 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.21■□□□□ 0.35
HIPK3Q9H422 AC005695.3-201ENST00000614522 232 ntBASIC17.21■□□□□ 0.35
HIPK3Q9H422 AP005019.2-201ENST00000615104 511 ntBASIC17.21■□□□□ 0.35
HIPK3Q9H422 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK3Q9H422 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.21■□□□□ 0.35
HIPK3Q9H422 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK3Q9H422 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK3Q9H422 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK3Q9H422 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
HIPK3Q9H422 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HIPK3Q9H422 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK3Q9H422 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HIPK3Q9H422 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK3Q9H422 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.21■□□□□ 0.34
HIPK3Q9H422 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HIPK3Q9H422 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HIPK3Q9H422 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HIPK3Q9H422 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.2■□□□□ 0.34
HIPK3Q9H422 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
HIPK3Q9H422 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.2■□□□□ 0.34
HIPK3Q9H422 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HIPK3Q9H422 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HIPK3Q9H422 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HIPK3Q9H422 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.2■□□□□ 0.34
HIPK3Q9H422 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HIPK3Q9H422 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HIPK3Q9H422 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HIPK3Q9H422 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HIPK3Q9H422 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.2■□□□□ 0.34
HIPK3Q9H422 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
HIPK3Q9H422 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.2■□□□□ 0.34
HIPK3Q9H422 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.2■□□□□ 0.34
HIPK3Q9H422 AKR7A2P1-201ENST00000460134 915 ntBASIC17.2■□□□□ 0.34
HIPK3Q9H422 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HIPK3Q9H422 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HIPK3Q9H422 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.2■□□□□ 0.34
HIPK3Q9H422 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.2■□□□□ 0.34
HIPK3Q9H422 ACTG1P17-201ENST00000558391 1119 ntBASIC17.2■□□□□ 0.34
HIPK3Q9H422 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.2■□□□□ 0.34
HIPK3Q9H422 AC145423.3-201ENST00000615987 467 ntBASIC17.2■□□□□ 0.34
HIPK3Q9H422 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HIPK3Q9H422 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HIPK3Q9H422 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HIPK3Q9H422 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HIPK3Q9H422 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HIPK3Q9H422 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HIPK3Q9H422 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HIPK3Q9H422 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK3Q9H422 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
HIPK3Q9H422 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK3Q9H422 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.19■□□□□ 0.34
HIPK3Q9H422 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
HIPK3Q9H422 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.19■□□□□ 0.34
HIPK3Q9H422 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK3Q9H422 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK3Q9H422 AL118508.1-201ENST00000613502 2345 ntBASIC17.19■□□□□ 0.34
HIPK3Q9H422 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.19■□□□□ 0.34
HIPK3Q9H422 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK3Q9H422 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.19■□□□□ 0.34
HIPK3Q9H422 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK3Q9H422 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
HIPK3Q9H422 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK3Q9H422 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK3Q9H422 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.19■□□□□ 0.34
HIPK3Q9H422 MTX1P1-201ENST00000440904 838 ntBASIC17.19■□□□□ 0.34
HIPK3Q9H422 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.19■□□□□ 0.34
HIPK3Q9H422 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.19■□□□□ 0.34
HIPK3Q9H422 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.19■□□□□ 0.34
HIPK3Q9H422 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.19■□□□□ 0.34
HIPK3Q9H422 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.19■□□□□ 0.34
HIPK3Q9H422 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK3Q9H422 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK3Q9H422 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
HIPK3Q9H422 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HIPK3Q9H422 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK3Q9H422 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.19■□□□□ 0.34
HIPK3Q9H422 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
HIPK3Q9H422 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK3Q9H422 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
HIPK3Q9H422 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK3Q9H422 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK3Q9H422 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
HIPK3Q9H422 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK3Q9H422 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.19■□□□□ 0.34
HIPK3Q9H422 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIPK3Q9H422 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms