Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 AC142381.4-202ENST00000563973 229 ntBASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 MPDU1-223ENST00000582151 728 ntBASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 AL390719.2-201ENST00000606993 987 ntBASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LCE3DQ9BYE3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
LCE3DQ9BYE3 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms