Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTFDC1Q9BY42 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTFDC1Q9BY42 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTFDC1Q9BY42 AC018735.1-201ENST00000437208 1502 ntBASIC19■□□□□ 0.63
RTFDC1Q9BY42 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19■□□□□ 0.63
RTFDC1Q9BY42 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19■□□□□ 0.63
RTFDC1Q9BY42 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19■□□□□ 0.63
RTFDC1Q9BY42 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RTFDC1Q9BY42 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTFDC1Q9BY42 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC19■□□□□ 0.63
RTFDC1Q9BY42 MIR663B-201ENST00000408361 115 ntBASIC19■□□□□ 0.63
RTFDC1Q9BY42 KRTAP10-13P-201ENST00000412914 571 ntBASIC19■□□□□ 0.63
RTFDC1Q9BY42 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RTFDC1Q9BY42 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC19■□□□□ 0.63
RTFDC1Q9BY42 RN7SL48P-201ENST00000579283 293 ntBASIC19■□□□□ 0.63
RTFDC1Q9BY42 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC19■□□□□ 0.63
RTFDC1Q9BY42 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19■□□□□ 0.63
RTFDC1Q9BY42 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC19■□□□□ 0.63
RTFDC1Q9BY42 TBCB-211ENST00000589996 724 ntTSL 3 BASIC19■□□□□ 0.63
RTFDC1Q9BY42 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTFDC1Q9BY42 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC19■□□□□ 0.63
RTFDC1Q9BY42 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTFDC1Q9BY42 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTFDC1Q9BY42 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
RTFDC1Q9BY42 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTFDC1Q9BY42 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RTFDC1Q9BY42 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RTFDC1Q9BY42 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTFDC1Q9BY42 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RTFDC1Q9BY42 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC19■□□□□ 0.63
RTFDC1Q9BY42 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC19■□□□□ 0.63
RTFDC1Q9BY42 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTFDC1Q9BY42 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 COG4-212ENST00000564653 590 ntTSL 5 BASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 AC092364.2-201ENST00000596710 2692 ntBASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTFDC1Q9BY42 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 MIR648-201ENST00000385046 94 ntBASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 KLF2P2-201ENST00000416807 1039 ntBASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 FNTAP2-201ENST00000430308 634 ntBASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 AC114812.1-204ENST00000449669 728 ntBASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 REEP1-202ENST00000453231 940 ntTSL 2 BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.98■□□□□ 0.63
RTFDC1Q9BY42 FOS-206ENST00000555347 1280 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms