Protein–RNA interactions for Protein: Q9BX63

BRIP1, Fanconi anemia group J protein, humanhuman

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1Q9BX63 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRIP1Q9BX63 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRIP1Q9BX63 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.41■□□□□ 0.7
BRIP1Q9BX63 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC19.41■□□□□ 0.7
BRIP1Q9BX63 CSH2-202ENST00000345366 598 ntTSL 5 BASIC19.41■□□□□ 0.7
BRIP1Q9BX63 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRIP1Q9BX63 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC19.41■□□□□ 0.7
BRIP1Q9BX63 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC19.41■□□□□ 0.7
BRIP1Q9BX63 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC19.41■□□□□ 0.7
BRIP1Q9BX63 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC19.41■□□□□ 0.7
BRIP1Q9BX63 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC19.41■□□□□ 0.7
BRIP1Q9BX63 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC19.41■□□□□ 0.7
BRIP1Q9BX63 HIST2H2BC-201ENST00000498492 580 ntBASIC19.41■□□□□ 0.7
BRIP1Q9BX63 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC19.41■□□□□ 0.7
BRIP1Q9BX63 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.41■□□□□ 0.7
BRIP1Q9BX63 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC19.41■□□□□ 0.7
BRIP1Q9BX63 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BRIP1Q9BX63 AC105129.2-201ENST00000559536 390 ntBASIC19.41■□□□□ 0.7
BRIP1Q9BX63 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC19.41■□□□□ 0.7
BRIP1Q9BX63 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC19.41■□□□□ 0.7
BRIP1Q9BX63 BX539320.1-201ENST00000623759 877 ntBASIC19.41■□□□□ 0.7
BRIP1Q9BX63 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRIP1Q9BX63 POLL-217ENST00000628479 1953 ntTSL 5 BASIC19.41■□□□□ 0.7
BRIP1Q9BX63 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRIP1Q9BX63 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
BRIP1Q9BX63 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRIP1Q9BX63 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRIP1Q9BX63 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 AC005052.1-201ENST00000625181 2492 ntBASIC19.4■□□□□ 0.7
BRIP1Q9BX63 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 RERG-205ENST00000537647 935 ntTSL 2 BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 LTB4R2-202ENST00000528054 3092 ntBASIC19.4■□□□□ 0.7
BRIP1Q9BX63 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRIP1Q9BX63 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
BRIP1Q9BX63 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
BRIP1Q9BX63 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.39■□□□□ 0.7
BRIP1Q9BX63 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
BRIP1Q9BX63 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
BRIP1Q9BX63 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
BRIP1Q9BX63 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BRIP1Q9BX63 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
BRIP1Q9BX63 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRIP1Q9BX63 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
BRIP1Q9BX63 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BRIP1Q9BX63 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRIP1Q9BX63 HNRNPA1P32-201ENST00000396326 963 ntBASIC19.39■□□□□ 0.69
BRIP1Q9BX63 MPV17-205ENST00000402310 906 ntTSL 5 BASIC19.39■□□□□ 0.69
BRIP1Q9BX63 MIR663B-201ENST00000408361 115 ntBASIC19.39■□□□□ 0.69
BRIP1Q9BX63 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC19.39■□□□□ 0.69
BRIP1Q9BX63 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
BRIP1Q9BX63 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC19.39■□□□□ 0.69
BRIP1Q9BX63 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC19.39■□□□□ 0.69
BRIP1Q9BX63 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
BRIP1Q9BX63 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
BRIP1Q9BX63 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC19.39■□□□□ 0.69
BRIP1Q9BX63 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC19.39■□□□□ 0.69
BRIP1Q9BX63 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BRIP1Q9BX63 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRIP1Q9BX63 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BRIP1Q9BX63 AC018735.1-201ENST00000437208 1502 ntBASIC19.39■□□□□ 0.69
BRIP1Q9BX63 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BRIP1Q9BX63 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRIP1Q9BX63 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRIP1Q9BX63 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRIP1Q9BX63 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRIP1Q9BX63 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
BRIP1Q9BX63 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRIP1Q9BX63 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRIP1Q9BX63 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
BRIP1Q9BX63 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms