Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 AC023274.1-201ENST00000418278 595 ntBASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 AC093724.1-201ENST00000448659 1027 ntBASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.69□□□□□ -0.38
CHRDL1Q9BU40 SLC9A7P1-201ENST00000554295 3311 ntBASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 AC002056.1-201ENST00000395613 760 ntBASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 AL161645.1-201ENST00000622716 1255 ntBASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 WASH6P-202ENST00000359512 1437 ntBASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHRDL1Q9BU40 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms