Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 AL133267.1-201ENST00000398220 340 ntBASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 MIR4313-201ENST00000580760 101 ntBASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 AC079328.2-201ENST00000561241 3354 ntBASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 AC063926.2-201ENST00000623766 1308 ntBASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5RAP1Q96SZ6 FER1L4-210ENST00000615531 5998 ntBASIC16.39■□□□□ 0.22
CDK5RAP1Q96SZ6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
CDK5RAP1Q96SZ6 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 NME2P1-201ENST00000426182 414 ntBASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 AL442647.2-201ENST00000429864 857 ntBASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 KRT18P64-201ENST00000434946 1219 ntBASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 GAPDHP21-201ENST00000450301 1010 ntBASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms