Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNX18Q96RF0 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNX18Q96RF0 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.54□□□□□ -0.08
SNX18Q96RF0 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.54□□□□□ -0.08
SNX18Q96RF0 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNX18Q96RF0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SNX18Q96RF0 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SNX18Q96RF0 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.53□□□□□ -0.08
SNX18Q96RF0 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNX18Q96RF0 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNX18Q96RF0 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SNX18Q96RF0 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNX18Q96RF0 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.53□□□□□ -0.08
SNX18Q96RF0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNX18Q96RF0 AC126755.1-201ENST00000525846 6405 ntBASIC14.53□□□□□ -0.08
SNX18Q96RF0 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SNX18Q96RF0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SNX18Q96RF0 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SNX18Q96RF0 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.53□□□□□ -0.08
SNX18Q96RF0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SNX18Q96RF0 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SNX18Q96RF0 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.53□□□□□ -0.08
SNX18Q96RF0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNX18Q96RF0 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.53□□□□□ -0.08
SNX18Q96RF0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.53□□□□□ -0.08
SNX18Q96RF0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SNX18Q96RF0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SNX18Q96RF0 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNX18Q96RF0 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNX18Q96RF0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SNX18Q96RF0 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.53□□□□□ -0.08
SNX18Q96RF0 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SNX18Q96RF0 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.53□□□□□ -0.08
SNX18Q96RF0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.53□□□□□ -0.08
SNX18Q96RF0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.53□□□□□ -0.08
SNX18Q96RF0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.53□□□□□ -0.08
SNX18Q96RF0 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
SNX18Q96RF0 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNX18Q96RF0 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNX18Q96RF0 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNX18Q96RF0 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.53□□□□□ -0.08
SNX18Q96RF0 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.53□□□□□ -0.08
SNX18Q96RF0 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNX18Q96RF0 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
SNX18Q96RF0 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.53□□□□□ -0.08
SNX18Q96RF0 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.53□□□□□ -0.08
SNX18Q96RF0 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.53□□□□□ -0.08
SNX18Q96RF0 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
SNX18Q96RF0 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.52□□□□□ -0.08
SNX18Q96RF0 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.52□□□□□ -0.08
SNX18Q96RF0 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.52□□□□□ -0.08
SNX18Q96RF0 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
SNX18Q96RF0 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SNX18Q96RF0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.52□□□□□ -0.08
SNX18Q96RF0 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SNX18Q96RF0 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SNX18Q96RF0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SNX18Q96RF0 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.52□□□□□ -0.08
SNX18Q96RF0 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
SNX18Q96RF0 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SNX18Q96RF0 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
SNX18Q96RF0 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
SNX18Q96RF0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.52□□□□□ -0.08
SNX18Q96RF0 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SNX18Q96RF0 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
SNX18Q96RF0 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SNX18Q96RF0 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
SNX18Q96RF0 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SNX18Q96RF0 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SNX18Q96RF0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SNX18Q96RF0 KRT18P2-201ENST00000447938 1258 ntBASIC14.52□□□□□ -0.09
SNX18Q96RF0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.52□□□□□ -0.09
SNX18Q96RF0 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
SNX18Q96RF0 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.52□□□□□ -0.09
SNX18Q96RF0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
SNX18Q96RF0 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SNX18Q96RF0 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SNX18Q96RF0 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SNX18Q96RF0 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SNX18Q96RF0 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.52□□□□□ -0.09
SNX18Q96RF0 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
SNX18Q96RF0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SNX18Q96RF0 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SNX18Q96RF0 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SNX18Q96RF0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SNX18Q96RF0 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SNX18Q96RF0 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.52□□□□□ -0.09
SNX18Q96RF0 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
SNX18Q96RF0 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SNX18Q96RF0 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
SNX18Q96RF0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.51□□□□□ -0.09
SNX18Q96RF0 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SNX18Q96RF0 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SNX18Q96RF0 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNX18Q96RF0 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.51□□□□□ -0.09
SNX18Q96RF0 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SNX18Q96RF0 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNX18Q96RF0 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
SNX18Q96RF0 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SNX18Q96RF0 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms