Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 AL596442.2-201ENST00000610240 980 ntBASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 AC144831.1-201ENST00000573312 2656 ntBASIC15.46■□□□□ 0.07
PDLIM5Q96HC4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
PDLIM5Q96HC4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.46■□□□□ 0.06
PDLIM5Q96HC4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
PDLIM5Q96HC4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PDLIM5Q96HC4 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
PDLIM5Q96HC4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.46■□□□□ 0.06
PDLIM5Q96HC4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 AL136379.1-201ENST00000623471 2642 ntBASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 TSEN15P1-201ENST00000423257 515 ntBASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PDLIM5Q96HC4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms