Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0A1Q93050 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 MIR658-201ENST00000385210 100 ntBASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 AC092552.1-201ENST00000547243 906 ntBASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0A1Q93050 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 RN7SL399P-201ENST00000471648 279 ntBASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 AL607033.1-201ENST00000623900 1599 ntBASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 AL603832.2-201ENST00000566195 2125 ntBASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
ATP6V0A1Q93050 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP6V0A1Q93050 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATP6V0A1Q93050 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ATP6V0A1Q93050 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP6V0A1Q93050 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP6V0A1Q93050 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.67■□□□□ 0.42
ATP6V0A1Q93050 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP6V0A1Q93050 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ATP6V0A1Q93050 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP6V0A1Q93050 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP6V0A1Q93050 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP6V0A1Q93050 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATP6V0A1Q93050 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATP6V0A1Q93050 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.67■□□□□ 0.42
ATP6V0A1Q93050 AC022210.1-201ENST00000449856 793 ntBASIC17.67■□□□□ 0.42
ATP6V0A1Q93050 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.67■□□□□ 0.42
ATP6V0A1Q93050 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.67■□□□□ 0.42
ATP6V0A1Q93050 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.67■□□□□ 0.42
ATP6V0A1Q93050 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.67■□□□□ 0.42
ATP6V0A1Q93050 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.67■□□□□ 0.42
ATP6V0A1Q93050 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.67■□□□□ 0.42
ATP6V0A1Q93050 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
ATP6V0A1Q93050 AL512343.1-201ENST00000605837 169 ntBASIC17.67■□□□□ 0.42
ATP6V0A1Q93050 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP6V0A1Q93050 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
ATP6V0A1Q93050 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP6V0A1Q93050 AC112504.1-201ENST00000623415 1841 ntBASIC17.67■□□□□ 0.42
ATP6V0A1Q93050 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.67■□□□□ 0.42
ATP6V0A1Q93050 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms