Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S1Q92572 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.03□□□□□ -0.16
AP3S1Q92572 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.03□□□□□ -0.16
AP3S1Q92572 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.03□□□□□ -0.16
AP3S1Q92572 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
AP3S1Q92572 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.03□□□□□ -0.16
AP3S1Q92572 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S1Q92572 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S1Q92572 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S1Q92572 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S1Q92572 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S1Q92572 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S1Q92572 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
AP3S1Q92572 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S1Q92572 RCN1P2-201ENST00000398357 915 ntBASIC14.03□□□□□ -0.16
AP3S1Q92572 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.03□□□□□ -0.16
AP3S1Q92572 MIR935-201ENST00000401179 91 ntBASIC14.03□□□□□ -0.16
AP3S1Q92572 AC117947.1-201ENST00000427448 529 ntBASIC14.03□□□□□ -0.16
AP3S1Q92572 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.03□□□□□ -0.16
AP3S1Q92572 ABCD1P5-201ENST00000445663 754 ntBASIC14.03□□□□□ -0.16
AP3S1Q92572 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
AP3S1Q92572 AC092647.4-201ENST00000457211 535 ntBASIC14.03□□□□□ -0.16
AP3S1Q92572 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.03□□□□□ -0.16
AP3S1Q92572 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.03□□□□□ -0.16
AP3S1Q92572 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S1Q92572 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S1Q92572 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
AP3S1Q92572 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.03□□□□□ -0.16
AP3S1Q92572 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S1Q92572 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.03□□□□□ -0.16
AP3S1Q92572 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.03□□□□□ -0.16
AP3S1Q92572 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S1Q92572 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S1Q92572 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
AP3S1Q92572 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
AP3S1Q92572 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
AP3S1Q92572 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S1Q92572 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S1Q92572 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S1Q92572 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S1Q92572 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP3S1Q92572 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.03□□□□□ -0.16
AP3S1Q92572 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
AP3S1Q92572 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP3S1Q92572 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
AP3S1Q92572 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP3S1Q92572 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
AP3S1Q92572 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
AP3S1Q92572 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP3S1Q92572 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP3S1Q92572 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.02□□□□□ -0.16
AP3S1Q92572 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP3S1Q92572 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
AP3S1Q92572 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
AP3S1Q92572 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP3S1Q92572 AC023024.2-201ENST00000623561 1993 ntBASIC14.02□□□□□ -0.16
AP3S1Q92572 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.02□□□□□ -0.16
AP3S1Q92572 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.02□□□□□ -0.16
AP3S1Q92572 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.02□□□□□ -0.16
AP3S1Q92572 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
AP3S1Q92572 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP3S1Q92572 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP3S1Q92572 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
AP3S1Q92572 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
AP3S1Q92572 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.02□□□□□ -0.17
AP3S1Q92572 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP3S1Q92572 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
AP3S1Q92572 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
AP3S1Q92572 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
AP3S1Q92572 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
AP3S1Q92572 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.02□□□□□ -0.17
AP3S1Q92572 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.02□□□□□ -0.17
AP3S1Q92572 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.02□□□□□ -0.17
AP3S1Q92572 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.02□□□□□ -0.17
AP3S1Q92572 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.02□□□□□ -0.17
AP3S1Q92572 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP3S1Q92572 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
AP3S1Q92572 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.02□□□□□ -0.17
AP3S1Q92572 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP3S1Q92572 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.02□□□□□ -0.17
AP3S1Q92572 AP005901.3-202ENST00000581653 237 ntBASIC14.02□□□□□ -0.17
AP3S1Q92572 MIR4497-201ENST00000583208 89 ntBASIC14.02□□□□□ -0.17
AP3S1Q92572 Z69720.1-201ENST00000601483 472 ntBASIC14.02□□□□□ -0.17
AP3S1Q92572 AC114341.1-201ENST00000618070 349 ntBASIC14.02□□□□□ -0.17
AP3S1Q92572 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP3S1Q92572 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP3S1Q92572 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP3S1Q92572 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
AP3S1Q92572 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.02□□□□□ -0.17
AP3S1Q92572 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.02□□□□□ -0.17
AP3S1Q92572 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
AP3S1Q92572 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP3S1Q92572 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP3S1Q92572 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP3S1Q92572 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
AP3S1Q92572 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.02□□□□□ -0.17
AP3S1Q92572 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
AP3S1Q92572 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
AP3S1Q92572 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
AP3S1Q92572 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms