Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
ALMS1Q8TCU4 RPS9P1-201ENST00000419943 583 ntBASIC10.4□□□□□ -0.75
ALMS1Q8TCU4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
ALMS1Q8TCU4 EIF3FP3-201ENST00000434851 1086 ntBASIC10.4□□□□□ -0.75
ALMS1Q8TCU4 AL157792.1-201ENST00000488281 530 ntBASIC10.4□□□□□ -0.75
ALMS1Q8TCU4 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.75
ALMS1Q8TCU4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
ALMS1Q8TCU4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 LRRC59-203ENST00000576448 1531 ntBASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 AL139094.1-201ENST00000405549 1188 ntBASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 AC114812.1-204ENST00000449669 728 ntBASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 AC073150.1-201ENST00000450406 1084 ntBASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 SNORD3B-2-202ENST00000571722 791 ntBASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 AL358472.3-201ENST00000608147 415 ntBASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 CASP16P-204ENST00000635032 809 ntBASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 AC105137.3-201ENST00000617588 984 ntBASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 RNF216P1-203ENST00000404404 2427 ntBASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 AC010141.1-201ENST00000411585 623 ntBASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 RN7SL67P-201ENST00000492147 296 ntBASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC10.39□□□□□ -0.75
ALMS1Q8TCU4 AL158070.2-201ENST00000623713 1621 ntBASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 RN7SKP175-201ENST00000408472 289 ntBASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 MIR5196-201ENST00000578146 115 ntBASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 NAP1L6-202ENST00000641404 1222 ntBASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 AC141586.5-201ENST00000624546 2050 ntBASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 HNRNPA1P41-201ENST00000397777 928 ntBASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 AC009093.2-202ENST00000620513 2079 ntBASIC10.38□□□□□ -0.75
ALMS1Q8TCU4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms