Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.04□□□□□ -0.16
DNAAF1Q8NEP3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DNAAF1Q8NEP3 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DNAAF1Q8NEP3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
DNAAF1Q8NEP3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DNAAF1Q8NEP3 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DNAAF1Q8NEP3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
DNAAF1Q8NEP3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
DNAAF1Q8NEP3 AC090616.6-203ENST00000579186 1945 ntBASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 AC079776.4-201ENST00000511039 504 ntBASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 IGHV3-22-201ENST00000520721 359 ntBASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 AL049840.3-201ENST00000602669 611 ntBASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 AL009183.1-201ENST00000603760 355 ntBASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.03□□□□□ -0.16
DNAAF1Q8NEP3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
DNAAF1Q8NEP3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
DNAAF1Q8NEP3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.02□□□□□ -0.16
DNAAF1Q8NEP3 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
DNAAF1Q8NEP3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
DNAAF1Q8NEP3 AC023908.3-201ENST00000564211 3047 ntBASIC14.02□□□□□ -0.16
DNAAF1Q8NEP3 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
DNAAF1Q8NEP3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
DNAAF1Q8NEP3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.02□□□□□ -0.16
DNAAF1Q8NEP3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
DNAAF1Q8NEP3 AC105250.1-201ENST00000509378 2057 ntBASIC14.02□□□□□ -0.16
DNAAF1Q8NEP3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
DNAAF1Q8NEP3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
DNAAF1Q8NEP3 AC007292.2-201ENST00000593524 1812 ntBASIC14.02□□□□□ -0.16
DNAAF1Q8NEP3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
DNAAF1Q8NEP3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.02□□□□□ -0.16
DNAAF1Q8NEP3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
DNAAF1Q8NEP3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.02□□□□□ -0.16
DNAAF1Q8NEP3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
DNAAF1Q8NEP3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.02□□□□□ -0.16
DNAAF1Q8NEP3 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
DNAAF1Q8NEP3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
DNAAF1Q8NEP3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
DNAAF1Q8NEP3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
DNAAF1Q8NEP3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
DNAAF1Q8NEP3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DNAAF1Q8NEP3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
DNAAF1Q8NEP3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.02□□□□□ -0.17
DNAAF1Q8NEP3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.02□□□□□ -0.17
DNAAF1Q8NEP3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DNAAF1Q8NEP3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.02□□□□□ -0.17
DNAAF1Q8NEP3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.02□□□□□ -0.17
DNAAF1Q8NEP3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
DNAAF1Q8NEP3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.02□□□□□ -0.17
DNAAF1Q8NEP3 KRT18P34-201ENST00000488218 1270 ntBASIC14.02□□□□□ -0.17
DNAAF1Q8NEP3 RNA5SP419-201ENST00000515908 135 ntBASIC14.02□□□□□ -0.17
DNAAF1Q8NEP3 RNA5SP415-201ENST00000517246 115 ntBASIC14.02□□□□□ -0.17
DNAAF1Q8NEP3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.02□□□□□ -0.17
DNAAF1Q8NEP3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DNAAF1Q8NEP3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.02□□□□□ -0.17
DNAAF1Q8NEP3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.02□□□□□ -0.17
DNAAF1Q8NEP3 AC023141.13-201ENST00000604991 943 ntBASIC14.02□□□□□ -0.17
DNAAF1Q8NEP3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
DNAAF1Q8NEP3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
DNAAF1Q8NEP3 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
DNAAF1Q8NEP3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DNAAF1Q8NEP3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
DNAAF1Q8NEP3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
DNAAF1Q8NEP3 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
DNAAF1Q8NEP3 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DNAAF1Q8NEP3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms