Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 TNRC18P2-201ENST00000417666 2714 ntBASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIMC1Q8NDZ2 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 CYP4F24P-201ENST00000586049 1580 ntBASIC15□□□□□ -0.01
SIMC1Q8NDZ2 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 AC138035.3-201ENST00000622706 2791 ntBASIC15□□□□□ -0.01
SIMC1Q8NDZ2 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SIMC1Q8NDZ2 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 AC105021.1-202ENST00000570572 669 ntBASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 AL133215.2-201ENST00000609242 977 ntBASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 Z92544.3-201ENST00000624747 417 ntBASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms