Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 MIR661-201ENST00000384842 89 ntBASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 AC015922.1-201ENST00000421102 1152 ntBASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 AC090616.6-203ENST00000579186 1945 ntBASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ZIC4Q8N9L1 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 TSPY16P-201ENST00000449843 468 ntBASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 TIMM17BP1-201ENST00000545713 516 ntBASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
ZIC4Q8N9L1 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms