Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.06■□□□□ 0.16
SYNPOQ8N3V7 HLA-A-202ENST00000376806 1854 ntBASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 CYP2T1P-202ENST00000641596 2535 ntBASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 BCYRN1-201ENST00000418539 200 ntBASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.05■□□□□ 0.16
SYNPOQ8N3V7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 BNIP3P1-202ENST00000550043 1585 ntBASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 AC134312.5-201ENST00000568031 1313 ntBASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 ACKR1-201ENST00000368121 1240 ntBASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 CLUHP6-201ENST00000580789 941 ntBASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 AC010328.2-201ENST00000597698 1111 ntBASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 RHOXF1P1-202ENST00000635473 501 ntBASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms