Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
LTBP4Q8N2S1 AC015909.3-201ENST00000572855 1794 ntBASIC21.23■□□□□ 0.99
LTBP4Q8N2S1 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
LTBP4Q8N2S1 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LTBP4Q8N2S1 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC21.23■□□□□ 0.99
LTBP4Q8N2S1 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
LTBP4Q8N2S1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
LTBP4Q8N2S1 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LTBP4Q8N2S1 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LTBP4Q8N2S1 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LTBP4Q8N2S1 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LTBP4Q8N2S1 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC21.23■□□□□ 0.99
LTBP4Q8N2S1 AC022188.1-201ENST00000620960 1664 ntBASIC21.23■□□□□ 0.99
LTBP4Q8N2S1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LTBP4Q8N2S1 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LTBP4Q8N2S1 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC21.23■□□□□ 0.99
LTBP4Q8N2S1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LTBP4Q8N2S1 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
LTBP4Q8N2S1 SURF4-203ENST00000371991 715 ntTSL 3 BASIC21.22■□□□□ 0.99
LTBP4Q8N2S1 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
LTBP4Q8N2S1 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC21.22■□□□□ 0.99
LTBP4Q8N2S1 GDNF-207ENST00000515058 764 ntTSL 5 BASIC21.22■□□□□ 0.99
LTBP4Q8N2S1 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC21.22■□□□□ 0.99
LTBP4Q8N2S1 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC21.22■□□□□ 0.99
LTBP4Q8N2S1 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC21.22■□□□□ 0.99
LTBP4Q8N2S1 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC21.22■□□□□ 0.99
LTBP4Q8N2S1 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC21.22■□□□□ 0.99
LTBP4Q8N2S1 EMC4-208ENST00000559078 599 ntTSL 3 BASIC21.22■□□□□ 0.99
LTBP4Q8N2S1 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC21.22■□□□□ 0.99
LTBP4Q8N2S1 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC21.22■□□□□ 0.99
LTBP4Q8N2S1 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LTBP4Q8N2S1 LINC01165-201ENST00000445190 1623 ntBASIC21.22■□□□□ 0.99
LTBP4Q8N2S1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LTBP4Q8N2S1 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC21.22■□□□□ 0.99
LTBP4Q8N2S1 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC21.22■□□□□ 0.99
LTBP4Q8N2S1 AC012441.2-201ENST00000444843 739 ntBASIC21.22■□□□□ 0.99
LTBP4Q8N2S1 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC21.22■□□□□ 0.99
LTBP4Q8N2S1 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC21.22■□□□□ 0.99
LTBP4Q8N2S1 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LTBP4Q8N2S1 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC21.22■□□□□ 0.99
LTBP4Q8N2S1 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LTBP4Q8N2S1 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LTBP4Q8N2S1 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
LTBP4Q8N2S1 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC21.22■□□□□ 0.99
LTBP4Q8N2S1 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC21.22■□□□□ 0.99
LTBP4Q8N2S1 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC21.22■□□□□ 0.99
LTBP4Q8N2S1 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
LTBP4Q8N2S1 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
LTBP4Q8N2S1 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LTBP4Q8N2S1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LTBP4Q8N2S1 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
LTBP4Q8N2S1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
LTBP4Q8N2S1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.21■□□□□ 0.99
LTBP4Q8N2S1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.21■□□□□ 0.99
LTBP4Q8N2S1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.21■□□□□ 0.99
LTBP4Q8N2S1 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
LTBP4Q8N2S1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
LTBP4Q8N2S1 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LTBP4Q8N2S1 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LTBP4Q8N2S1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LTBP4Q8N2S1 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LTBP4Q8N2S1 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LTBP4Q8N2S1 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LTBP4Q8N2S1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.21■□□□□ 0.99
LTBP4Q8N2S1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LTBP4Q8N2S1 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LTBP4Q8N2S1 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC21.21■□□□□ 0.99
LTBP4Q8N2S1 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LTBP4Q8N2S1 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC21.21■□□□□ 0.99
LTBP4Q8N2S1 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC21.21■□□□□ 0.99
LTBP4Q8N2S1 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC21.21■□□□□ 0.99
LTBP4Q8N2S1 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LTBP4Q8N2S1 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC21.21■□□□□ 0.99
LTBP4Q8N2S1 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC21.21■□□□□ 0.99
LTBP4Q8N2S1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LTBP4Q8N2S1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
LTBP4Q8N2S1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
LTBP4Q8N2S1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
LTBP4Q8N2S1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
LTBP4Q8N2S1 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC21.2■□□□□ 0.98
LTBP4Q8N2S1 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LTBP4Q8N2S1 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LTBP4Q8N2S1 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LTBP4Q8N2S1 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LTBP4Q8N2S1 AC083801.1-201ENST00000491689 358 ntBASIC21.2■□□□□ 0.98
LTBP4Q8N2S1 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC21.2■□□□□ 0.98
LTBP4Q8N2S1 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC21.2■□□□□ 0.98
LTBP4Q8N2S1 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC21.2■□□□□ 0.98
LTBP4Q8N2S1 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
LTBP4Q8N2S1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LTBP4Q8N2S1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LTBP4Q8N2S1 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LTBP4Q8N2S1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LTBP4Q8N2S1 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC21.2■□□□□ 0.98
LTBP4Q8N2S1 AC055811.4-201ENST00000624039 1754 ntBASIC21.2■□□□□ 0.98
LTBP4Q8N2S1 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC21.2■□□□□ 0.98
LTBP4Q8N2S1 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LTBP4Q8N2S1 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC21.2■□□□□ 0.98
LTBP4Q8N2S1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LTBP4Q8N2S1 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms