Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC127383.1-201ENST00000444697 1800 ntBASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 BX842568.4-201ENST00000421222 227 ntBASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 HNRNPUP1-201ENST00000554987 333 ntBASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 AC093520.2-201ENST00000561830 333 ntBASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 AC105021.1-202ENST00000570572 669 ntBASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 AC004835.2-201ENST00000603762 682 ntBASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 AL596257.1-201ENST00000641463 2694 ntBASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CDKL3Q8IVW4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 AL109954.1-202ENST00000564051 2148 ntBASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 AC010327.4-202ENST00000591484 748 ntBASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKL3Q8IVW4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms