Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 AP001282.1-201ENST00000531301 1499 ntBASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 AP002472.1-201ENST00000577490 586 ntBASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 AC136621.1-201ENST00000624017 2304 ntBASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC50Q8IVM0 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 RARRES2P8-201ENST00000566335 367 ntBASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 AC120114.3-201ENST00000611923 658 ntBASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 AC092865.6-201ENST00000642101 219 ntBASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 OR2I1P-209ENST00000641730 5365 ntBASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC50Q8IVM0 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 SSR4P1-203ENST00000599569 2260 ntBASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 AL138918.1-201ENST00000568306 659 ntBASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 AC099522.2-201ENST00000607001 744 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms