Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NUDCD3Q8IVD9 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 AC026396.1-201ENST00000419388 421 ntBASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 AC092474.2-201ENST00000424288 719 ntBASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 HNRNPDP1-201ENST00000439535 754 ntBASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 PMS2P7-201ENST00000506558 1336 ntBASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 AC126365.1-201ENST00000578585 1514 ntBASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 AC018892.3-201ENST00000623986 2499 ntBASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NUDCD3Q8IVD9 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 RPS2P28-201ENST00000314255 741 ntBASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 UPK3BP1-201ENST00000428678 509 ntBASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 TP73-AS1-207ENST00000624167 988 ntBASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms