Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 C2orf69P2-201ENST00000562032 1123 ntBASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 AL139099.5-201ENST00000635274 300 ntBASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 AC068587.10-201ENST00000641210 219 ntBASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 AL138709.1-201ENST00000614840 1693 ntBASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 AHCYP2-201ENST00000430630 1300 ntBASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 GOLGA2P4-201ENST00000441462 777 ntBASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 Z93015.1-201ENST00000451718 390 ntBASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 KRT8P13-201ENST00000463294 1010 ntBASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 ZNF767P-206ENST00000513792 565 ntBASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 MIR4313-201ENST00000580760 101 ntBASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 AL118558.3-201ENST00000607414 1079 ntBASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS4Q8IUM7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS4Q8IUM7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms