Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB43Q86YS6 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB43Q86YS6 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB43Q86YS6 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB43Q86YS6 AL080243.2-201ENST00000418783 582 ntBASIC15.23■□□□□ 0.03
RAB43Q86YS6 GAPDHP21-201ENST00000450301 1010 ntBASIC15.23■□□□□ 0.03
RAB43Q86YS6 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.23■□□□□ 0.03
RAB43Q86YS6 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RAB43Q86YS6 BANF1P1-201ENST00000553684 263 ntBASIC15.23■□□□□ 0.03
RAB43Q86YS6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.23■□□□□ 0.03
RAB43Q86YS6 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB43Q86YS6 SPDYE22P-201ENST00000582158 798 ntBASIC15.23■□□□□ 0.03
RAB43Q86YS6 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RAB43Q86YS6 AL133215.2-201ENST00000609242 977 ntBASIC15.23■□□□□ 0.03
RAB43Q86YS6 AL844908.2-201ENST00000609461 460 ntBASIC15.23■□□□□ 0.03
RAB43Q86YS6 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB43Q86YS6 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.23■□□□□ 0.03
RAB43Q86YS6 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RAB43Q86YS6 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RAB43Q86YS6 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB43Q86YS6 AC078925.2-201ENST00000624013 1973 ntBASIC15.23■□□□□ 0.03
RAB43Q86YS6 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB43Q86YS6 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB43Q86YS6 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.23■□□□□ 0.03
RAB43Q86YS6 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB43Q86YS6 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB43Q86YS6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB43Q86YS6 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB43Q86YS6 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RAB43Q86YS6 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
RAB43Q86YS6 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
RAB43Q86YS6 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RAB43Q86YS6 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RAB43Q86YS6 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB43Q86YS6 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB43Q86YS6 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB43Q86YS6 AL589702.1-201ENST00000641229 1509 ntBASIC15.22■□□□□ 0.03
RAB43Q86YS6 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.22■□□□□ 0.03
RAB43Q86YS6 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RAB43Q86YS6 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB43Q86YS6 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB43Q86YS6 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RAB43Q86YS6 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB43Q86YS6 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB43Q86YS6 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RAB43Q86YS6 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB43Q86YS6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB43Q86YS6 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB43Q86YS6 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB43Q86YS6 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB43Q86YS6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB43Q86YS6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB43Q86YS6 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB43Q86YS6 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB43Q86YS6 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB43Q86YS6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB43Q86YS6 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB43Q86YS6 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB43Q86YS6 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB43Q86YS6 SPTLC1P1-201ENST00000447199 261 ntBASIC15.22■□□□□ 0.03
RAB43Q86YS6 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RAB43Q86YS6 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RAB43Q86YS6 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB43Q86YS6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.22■□□□□ 0.03
RAB43Q86YS6 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.22■□□□□ 0.03
RAB43Q86YS6 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB43Q86YS6 AC025048.6-201ENST00000634326 1161 ntBASIC15.22■□□□□ 0.03
RAB43Q86YS6 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB43Q86YS6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB43Q86YS6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB43Q86YS6 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB43Q86YS6 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RAB43Q86YS6 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RAB43Q86YS6 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB43Q86YS6 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB43Q86YS6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB43Q86YS6 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB43Q86YS6 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB43Q86YS6 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB43Q86YS6 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB43Q86YS6 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB43Q86YS6 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB43Q86YS6 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.22■□□□□ 0.03
RAB43Q86YS6 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB43Q86YS6 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB43Q86YS6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RAB43Q86YS6 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB43Q86YS6 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB43Q86YS6 BTBD7P1-201ENST00000447253 1453 ntBASIC15.21■□□□□ 0.03
RAB43Q86YS6 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB43Q86YS6 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB43Q86YS6 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RAB43Q86YS6 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB43Q86YS6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB43Q86YS6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RAB43Q86YS6 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB43Q86YS6 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB43Q86YS6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB43Q86YS6 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB43Q86YS6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms