Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRTM1Q86UE6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 FGD5P1-202ENST00000614866 2498 ntBASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 FAM197Y8-203ENST00000450145 560 ntBASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 AC243562.2-201ENST00000561247 970 ntBASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 AL445228.2-201ENST00000605589 952 ntBASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 IFNL4P1-201ENST00000607083 540 ntBASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 C8orf49-201ENST00000525043 1968 ntBASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 AC023024.2-201ENST00000623561 1993 ntBASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.81□□□□□ -0.2
LRRTM1Q86UE6 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 MROH4P-201ENST00000431302 1578 ntBASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 REXO1L1P-202ENST00000608646 1974 ntBASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 MIR600HG-201ENST00000449175 5984 ntBASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.8□□□□□ -0.2
LRRTM1Q86UE6 RHOQP3-201ENST00000437982 621 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms