Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
OTOP1Q7RTM1 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
OTOP1Q7RTM1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.22■□□□□ 0.51
OTOP1Q7RTM1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
OTOP1Q7RTM1 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
OTOP1Q7RTM1 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
OTOP1Q7RTM1 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 C2orf27AP3-201ENST00000434123 579 ntBASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 AC245100.5-201ENST00000452108 331 ntBASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 HIST2H2BC-201ENST00000498492 580 ntBASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 AL354718.3-201ENST00000616414 581 ntBASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 CR382287.1-201ENST00000623954 586 ntBASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 MTHFR-217ENST00000641820 1569 ntBASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
OTOP1Q7RTM1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
OTOP1Q7RTM1 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 AP006547.1-201ENST00000563435 692 ntBASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 AC020914.3-201ENST00000594712 304 ntBASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 AC005252.2-201ENST00000624630 1141 ntBASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 PCDHB19P-201ENST00000570871 2371 ntBASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
OTOP1Q7RTM1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.19■□□□□ 0.5
OTOP1Q7RTM1 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
OTOP1Q7RTM1 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
OTOP1Q7RTM1 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
OTOP1Q7RTM1 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
OTOP1Q7RTM1 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
OTOP1Q7RTM1 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
OTOP1Q7RTM1 AL596087.1-201ENST00000400979 1969 ntBASIC18.19■□□□□ 0.5
OTOP1Q7RTM1 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
OTOP1Q7RTM1 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms