Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 AC138035.3-201ENST00000622706 2791 ntBASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 AC006486.2-201ENST00000624246 2199 ntBASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 FAM45BP-202ENST00000592932 1624 ntBASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 AC002056.1-201ENST00000395613 760 ntBASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 AC034105.1-201ENST00000563488 319 ntBASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SMARCD3Q6STE5 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.52□□□□□ -0.08
SMARCD3Q6STE5 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SMARCD3Q6STE5 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
SMARCD3Q6STE5 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.52□□□□□ -0.08
SMARCD3Q6STE5 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.52□□□□□ -0.08
SMARCD3Q6STE5 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SMARCD3Q6STE5 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SMARCD3Q6STE5 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SMARCD3Q6STE5 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
SMARCD3Q6STE5 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SMARCD3Q6STE5 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SMARCD3Q6STE5 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SMARCD3Q6STE5 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.52□□□□□ -0.08
SMARCD3Q6STE5 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SMARCD3Q6STE5 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SMARCD3Q6STE5 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
SMARCD3Q6STE5 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
SMARCD3Q6STE5 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
SMARCD3Q6STE5 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SMARCD3Q6STE5 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
SMARCD3Q6STE5 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SMARCD3Q6STE5 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SMARCD3Q6STE5 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 AC074386.1-202ENST00000463561 864 ntBASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 AC098859.1-201ENST00000502915 1238 ntBASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 KRT126P-201ENST00000549467 1181 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms