Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 FAM86C2P-203ENST00000528684 1004 ntBASIC16.24■□□□□ 0.19
CASC4Q6P4E1 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.24■□□□□ 0.19
CASC4Q6P4E1 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 AC008267.7-201ENST00000624570 1194 ntBASIC16.24■□□□□ 0.19
CASC4Q6P4E1 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.24■□□□□ 0.19
CASC4Q6P4E1 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.24■□□□□ 0.19
CASC4Q6P4E1 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 RN7SL589P-201ENST00000481268 310 ntBASIC16.23■□□□□ 0.19
CASC4Q6P4E1 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 AC018892.3-201ENST00000623986 2499 ntBASIC16.23■□□□□ 0.19
CASC4Q6P4E1 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.23■□□□□ 0.19
CASC4Q6P4E1 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 AC023824.1-201ENST00000562945 2975 ntBASIC16.22■□□□□ 0.19
CASC4Q6P4E1 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms